XLOC_028946 (si:dkeyp-87d1.1)


Basic Information

Item Value
gene id XLOC_028946
gene name si:dkeyp-87d1.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 36789137 ~ 36791395 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00056013
ACAACATTGCTCTCCAAATAGAGACTTGGTTGTAATAGGTTGAATGAGTGGGCCTTACAAACCATTCACCTTTACTTCCAGAGAATTGTATTTTCTCTTgtcttttgctcttttttttcatAAGTTTTCTTTATGCAATAGTGAGAGTGTGAGTAGGCTACTCCATATTCTCTCCTCTCTCTCAGGATTCTGTACAACACATGTGGAATTACAGCCTGattaCCAAGGCTTTTATGGTCAGCAGACATGGACCTCACTGCTGAGAATTAACCTGGCATCTTAATTCTTCATTACCTATGTTGTCTctatgttgtttgattaatgttcAGATTTTGTTCATTTGGTTGCACTTGTATGTACTGgaagttgtttattttctttagtgttgttattacttgatattactattatatatacaGTCTTCTACTGTGCCGTTATTTCACATTCTTAATAAAAAGTTGCAGAAATGA
>TCONS_00056014
CTGTGTTGCAGTGAAGGAGCACAAAGTACCGTTGTCACACGAACAGGAACTTTGGTTCAACTTGTACTTCAATGAGGTGCGGCCAGTAATGCTGCAAGAAAACCGCACCGGCGACAATGTGGCAGTTGATTCATTTTTTGTGTCAAGTAGTGGGAGATCGATTTATAATCCCTCCAACGACTTAAAAAGACTACATGACAAATACAGTCTTCCCAGTGTGACGTGTGGCGATGCCCAGAGAGCATTTGAGGCAGCAGCACAAAACCTGTCAGAAGTGGAGAGAAATGTGGCAGCTGAAAGGAACTACATGAGGAGAACGTCTTCAGATCCGTTTCTGGCTCTAAGTGTGCTAGATCAGCTTGCTGGGAAAACACCACAAAGGTCCAGTAGAGCTTCCTGCTGTGAGACAAGGGTGGACGAACAGACGGCCTACAAAACTCTTGAGCAGTTCTGTCCAGTGACTCTGGAGGGGCCTCCTCCAAAAAGGTCACGCAGGACTGAGCTGTGTGGCTCAGAACATGAGAGGCACTGCTATGACCGCTGGCGTAGCGAGCAGCTCAAGCTGCGTGAACAGCATGCTCTCGAACACTTTACTGGACAGCAGCCATCAGAGTCCAAAATAAGCCGCTGGATGGACAAACAAGGGTGGACGTCAAACGTCCCACAGGCTGCAGTGGTTCTGAAGCAGTGGAAGCCTGTTGCCAGGTTGGACTTGGTCATCGACAGCAGCTTTGTGAAAAAAATGATTTTGTCTCAACGCTGGAAAGGACTGACTGTCAGGCCCGTCCCTGACAAGGGCGATGGTATTTTCACCAAAAGACCATTTCAGATCGGGGAGGTTGTCTGTGAATACCACGGCGAGCTGGTTAGCCATGAAGATGGGATGGCAATAGCTTCGACAAGCAGCATCAGAGCTggccatttgtttttttataggaACAAGCAACATGAAGCCATGTGCATTGACGCACATGAAGAAAGTTGCCAGTGCCATCCCATGAAGTTCAATTATGGACGCCTGATCCGTCACTCCAGCAAAAGAGCCAATATCCGGCCCAGGCTGTATGTCCTTAATGATAGAGACATCATTCTCTTCATTGCTACAAAAGACATTTCGAGTGATGAGGAGTTACTCTATGATTATGGCTCAAAGAGGAGATCTTTTGCCGGGAAAGGGCTGGAATTGGACTGGATGTAAAACAACATCTTTCCATCCTCCATACTGACTCACTTCTAACATGTCCAACTCCAAGTTTCCACCTGTGGCCATATTCTCTTCTCAGTGATGGACAACCATCACTGCTCCTCTCACCCTGTACCCAGTACTCTTTCTGCACTGCCAAGCAACAACATTGCTCTCCAAATAGAGACTTGGTTGTAATAGGTTGAATGAGTGGGCCTTACAAACCATTCACCTTTACTTCCAGAGAATTGTATTTTCTCTTgtcttttgctcttttttttcatAAGTTTTCTTTATGCAATAGTGAGAGTGTGAGTAGGCTACTCCATATTCTCTCCTCTCTCTCAGGATTCTGTACAACACATGTGGAATTACAGCCTGGTAAGTACGCTCAAACTGCTCTTAACCCTCCCTTACACCCATCTTTAAGTTTCAACCAAATTATTGAGCACTTTCTGGTTGTCGTcttctttttgtttcagattaCCAAGGCTTTTATGGTCAGCAGACATGGACCTCACTGCTGAGAATTAACCTGGCATCTTAATTCTTCATTACCTATGTTGTCTctatgttgtttgattaatgttcAGATTTTGTTCATTTGGTTGCACTTGTATGTACTGgaagttgtttattttctttagtgttgttattacttgatattactattatatatacaGTCTTCTACTGTGCCGTTATTTCACATTCTTAATAAAAAGTTGCAGAAATGA
>TCONS_00056015
CTGTCAGAAGTGGAGAGAAATGTGGCAGCTGAAAGGAACTACATGAGGAGAACGTCTTCAGATCCGTTTCTGGCTCTAAGTGTGCTAGATCAGCTTGCTGGGAAAACACCCAGCCATCAGAGTCCAAAATAAGCCGCTGGATGGACAAACAAGGGTGGACGTCAAACGTCCCACAGGCTGCAGTGGTTCTGAAGCAGTGGAAGCCTGTTGCCAGGTTGGACTTGGTCATCGACAGCAGCTTTGTGAAAAAAATGATTTTGTCTCAACGCTGGAAAGGACTGACTGTCAGGCCCGTCCCTGACAAGGGCGATGGTATTTTCACCAAAAGACCATTTCAGATCGGGGAGGTTGTCTGTGAATACCACGGCGAGCTGGTTAGCCATG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-75 No description available

Ensembl:

ensembl_id ENSDARG00000104681

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00056013 False 470 processed_transcript 0.35 2 36789137 36789707
TCONS_00056014 False 1917 mRNA 0.45 5 36789137 36791395
TCONS_00056015 True 384 processed_transcript 0.51 2 36790179 36790965

Neighbor

gene id symbol gene type direction distance location
XLOC_028944 NA coding downstream 203498 36585319 ~ 36585639 (-)
XLOC_028943 NA coding downstream 205769 36581203 ~ 36583368 (-)
XLOC_028942 BX649453.1 coding downstream 266580 36506439 ~ 36522557 (-)
XLOC_028941 NA coding downstream 292843 36494958 ~ 36496294 (-)
XLOC_028940 si:dkey-238o14.1 coding downstream 304194 36473781 ~ 36484943 (-)
XLOC_028947 si:dkeyp-87d1.1 coding upstream 337 36791732 ~ 36792144 (-)
XLOC_028948 si:dkeyp-87d1.1 coding upstream 879 36792274 ~ 36793658 (-)
XLOC_028949 si:dkey-3p4.7 coding upstream 439192 37230587 ~ 37236494 (-)
XLOC_028950 NA coding upstream 475815 37267210 ~ 37271230 (-)
XLOC_028951 NA coding upstream 480623 37272018 ~ 37273043 (-)
XLOC_028935 NA non-coding downstream 977899 35809453 ~ 35811238 (-)
XLOC_028934 CABZ01087265.1 non-coding downstream 1053968 35735006 ~ 35735169 (-)
XLOC_028952 NA non-coding upstream 537132 37328527 ~ 37333793 (-)
XLOC_028953 NA non-coding upstream 587742 37379137 ~ 37380416 (-)
XLOC_028956 NA non-coding upstream 815014 37606409 ~ 37607499 (-)

Expression


Co-expression Network