Gene
RNA
| Item | Value |
|---|---|
| gene id | G1010544 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 68843460 ~ 68843705 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: protein patched homolog 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1149481 | True | 246 | lncRNA | 0.63 | 1 | 68843460 | 68843705 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535100 | LOC106580549 | coding | downstream | 257967 | 68554386 ~ 68585493 (-) |
| LOC110536290 | ccdc183 | coding | downstream | 290546 | 68536798 ~ 68552914 (-) |
| LOC110535099 | LOC106580537 | coding | downstream | 338221 | 68445137 ~ 68505239 (-) |
| LOC110536288 | rabl6 | coding | downstream | 718589 | 68110512 ~ 68124871 (-) |
| imp4 | LOC106580531 | coding | downstream | 744655 | 68095565 ~ 68098805 (-) |
| LOC110536294 | cssa24h9orf3 | coding | upstream | 90248 | 68933953 ~ 68991741 (-) |
| LOC110535102 | LOC106580556 | coding | upstream | 260399 | 69104104 ~ 69187259 (-) |
| LOC110536298 | tmem252 | coding | upstream | 424595 | 69268300 ~ 69270450 (-) |
| LOC110536299 | zswim6 | coding | upstream | 463243 | 69306948 ~ 69395042 (-) |
| LOC110536301 | NA | coding | upstream | 556845 | 69400550 ~ 69404206 (-) |
| G1010534 | NA | non-coding | downstream | 11918 | 68831311 ~ 68831542 (-) |
| G1010505 | NA | non-coding | downstream | 48296 | 68794943 ~ 68795164 (-) |
| G1010487 | NA | non-coding | downstream | 85394 | 68757863 ~ 68758066 (-) |
| G1010484 | NA | non-coding | downstream | 89066 | 68754155 ~ 68754394 (-) |
| G1010483 | NA | non-coding | downstream | 89943 | 68752980 ~ 68753517 (-) |
| G1010547 | NA | non-coding | upstream | 5589 | 68849294 ~ 68850142 (-) |
| G1010795 | NA | non-coding | upstream | 56818 | 68900523 ~ 68900741 (-) |
| G1010798 | NA | non-coding | upstream | 62889 | 68906594 ~ 68907032 (-) |
| G1010801 | NA | non-coding | upstream | 70889 | 68914594 ~ 68914914 (-) |
| G1010803 | NA | non-coding | upstream | 72392 | 68916097 ~ 68916312 (-) |
| G1010443 | NA | other | downstream | 155498 | 68687257 ~ 68687962 (-) |
| G1009720 | NA | other | downstream | 872132 | 67971071 ~ 67971328 (-) |
| G1007506 | NA | other | downstream | 2470511 | 66372642 ~ 66372949 (-) |
| G1006106 | NA | other | downstream | 3743904 | 65098960 ~ 65099556 (-) |
| G1005628 | LOC106580457 | other | downstream | 4479683 | 64360764 ~ 64363777 (-) |
| G1010922 | NA | other | upstream | 272802 | 69116507 ~ 69119486 (-) |
| G1011014 | NA | other | upstream | 461631 | 69305336 ~ 69306428 (-) |
| G1012814 | NA | other | upstream | 2040771 | 70884476 ~ 70890991 (-) |
| G1013669 | NA | other | upstream | 2653603 | 71497308 ~ 71515434 (-) |
| G1013960 | NA | other | upstream | 3152376 | 71996081 ~ 71996688 (-) |
