G1010547


Basic Information

Item Value
gene id G1010547
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 68849294 ~ 68850142 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1149485
ttaaagttaTAAAAAAAGAGACAAATAAGTtataatatttgtatttgttagaATTCTATCAGTGTTTGAACATTAGTATTTAGAGAGCTGGTACAACTTCTACTTTCATGGCCAGCCTTTGACAAACCCATAGAAACAGCTGGCTGAGTTCTCTCCCCTATGATAGATAATACTGAGTGGGACGAGTCAGTCAATGCCGTCAGAGCCAGTTAGCGATGAAAGTGTGCACCGTAGGATTTTTCTCTGTTATGGTATTATTACATATAAActcttaaaaatatatacttctgtcaAATAACTTGACAACTATGTAcactacaaaaatacattttcatataAATAAATTATATGGCATACATTTATCTTTGTAACTGAAACAATATATATCCTCGCCAACCAAGACCAAATGGCATCTGTAGAAAGCCATAGATCTGTTTCTTTTCCTTTTAAAATCCTCTAAGAGCTATGGTGAGTCTTGTAGTGTAAATGTTATATACTCTGGTTTCCCTACTTAACATTAGTAAACATTTTATACAGATTGAACACCATTCATGTCAAAACAACAGTAATAGTGTTTTTCAATAGACATAAAAATCCCTGCATTTGTTATCCACTGACATTTATGACCAATAatggaacaaaacaaaaacatctcataatacaaaaatataaatatcgCAAATTCAACGTTGAAAAACcaaacacaaacaaaacattacaaaatgtAAGAAAATAGTTGCCAGCCATGATTTCTCTCCATTATTGCCAATGTGACATcaggagggaaaaaaatattttcactCAAGCAGCTGACACGCAAAAAGACACATagctacacgtgtgtgtgtg
>TU1149487
ATTCTATCAGTGTTTGAACATTAGTATTTAGAGAGCTGGTACAACTTCTACTTTCATGGCCAGCCTTTGACAAACCCATAGAAACAGCTGGCTGAGTTCTCTCCCCTATGATAGATAATACTGAGTGGGACGAGTCAGTCAATGCCGTCAGAGCCAGTTAGCGATGAAAGTGTGCACCGTAGGATTTTTCTCTGTTATGGTATTATTACATATAAActcttaaaaatatatacttctgtcaAATAACTTGACAACTATGTAcactacaaaaatacattttcatataAATAAATTATATGGCATACATTTATCTTTGTAACTGAAACAATATATATCCTCGCCAACCAAGACCAAATGGCATCTGTAGAAAGCCATAGATCTGTTTCTTTTCCTTTTAAAATCCTCTAAGAGCTATGGTGAGTCTTGTAGTGTAAATGTTATATACTCTGGTTTCCCTACTTAACATTAGTAAACATTTTATACAGATTGAACACCATTCATGTCAAAACAACAGTAATAGTGTTTTTCAATAGACATAAAAATCCCTGCATTTGTTATCCACTGACATTTATGACCAATAatggaacaaaacaaaaacatctcataatacaaaaatataaatatcgCAAATTCAACGTTGAAAAACcaaacacaaacaaaacattacaaaatgtAAGAAAATAGTTGCCAGCCATGATTTCTCTCCATTATTGCCAATGTGACATcaggagggaaaaaaatattttcactCAAGCAGCTGACACGCAAAAAGACACATagctacacgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1149485 False 849 lncRNA 0.33 1 68849294 68850142
TU1149487 True 797 lncRNA 0.34 1 68849294 68850090

Neighbor

gene id symbol gene type direction distance location
LOC110535100 LOC106580549 coding downstream 263801 68554386 ~ 68585493 (-)
LOC110536290 ccdc183 coding downstream 296380 68536798 ~ 68552914 (-)
LOC110535099 LOC106580537 coding downstream 344055 68445137 ~ 68505239 (-)
LOC110536288 rabl6 coding downstream 724423 68110512 ~ 68124871 (-)
imp4 LOC106580531 coding downstream 750489 68095565 ~ 68098805 (-)
LOC110536294 cssa24h9orf3 coding upstream 83811 68933953 ~ 68991741 (-)
LOC110535102 LOC106580556 coding upstream 253962 69104104 ~ 69187259 (-)
LOC110536298 tmem252 coding upstream 418158 69268300 ~ 69270450 (-)
LOC110536299 zswim6 coding upstream 456806 69306948 ~ 69395042 (-)
LOC110536301 NA coding upstream 550408 69400550 ~ 69404206 (-)
G1010544 NA non-coding downstream 5589 68843460 ~ 68843705 (-)
G1010534 NA non-coding downstream 17752 68831311 ~ 68831542 (-)
G1010505 NA non-coding downstream 54130 68794943 ~ 68795164 (-)
G1010487 NA non-coding downstream 91228 68757863 ~ 68758066 (-)
G1010484 NA non-coding downstream 94900 68754155 ~ 68754394 (-)
G1010795 NA non-coding upstream 50381 68900523 ~ 68900741 (-)
G1010798 NA non-coding upstream 56452 68906594 ~ 68907032 (-)
G1010801 NA non-coding upstream 64452 68914594 ~ 68914914 (-)
G1010803 NA non-coding upstream 65955 68916097 ~ 68916312 (-)
G1010794 NA non-coding upstream 68322 68918464 ~ 68919392 (-)
G1010443 NA other downstream 161332 68687257 ~ 68687962 (-)
G1009720 NA other downstream 877966 67971071 ~ 67971328 (-)
G1007506 NA other downstream 2476345 66372642 ~ 66372949 (-)
G1006106 NA other downstream 3749738 65098960 ~ 65099556 (-)
G1005628 LOC106580457 other downstream 4485517 64360764 ~ 64363777 (-)
G1010922 NA other upstream 266365 69116507 ~ 69119486 (-)
G1011014 NA other upstream 455194 69305336 ~ 69306428 (-)
G1012814 NA other upstream 2034334 70884476 ~ 70890991 (-)
G1013669 NA other upstream 2647166 71497308 ~ 71515434 (-)
G1013960 NA other upstream 3145939 71996081 ~ 71996688 (-)

Expression


Co-expression Network