G1010791


Basic Information

Item Value
gene id G1010791
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 68919495 ~ 68920707 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1149760
tcgatattgagctcaggtgcgtcctgtttccattgatcgtccttgagatgtttctacaacttgaatggagtccacctgtggtaaatttaattgactggacatgatttggaaaggcacacatctgtcaattcaaggtcccacacacagtggccaccatcattcttaaatggaagaagtttggaacaacctagactcttcctagagctggcgacCCGGCCAAATTGAGAAATTGGGGGAGAAGTgtattggtcagggaggtgaccaagaacccgatggtcactctgacagagctctagatttcctctgtggagatgggagaaccttccagaaggacaaccatctctgcagcactccaccaatcaggcctttatggtagtgtggccagacggaagcaagtctcagtaaaaggcaaatgccagcctgcttggagtttgtcaaagggcacctaaagactctcagacaatgagaagcaagattctctggtctgatgaaaccaagattcaactctttggcctgaatgccaagcgtcacgtcgggaggaaacctggcaccatccctacggtgaagcatgatggtggcagcattatgctgtggggatgtttatcagtggcagggactgggagactagtcaggatcaagcaaaatatgaacggagcaaagtacagagagatccttgatgaaaacctgcttcagagcgctcaggtcctcagacttgggtgaaggttcaccttccaacagggaaatgacactaagcacacagccaagacaaggcaggagtggcttcggaacaagtctctgaatgtccttgagtggtccatccagggcccggacttgaaccagatccaacatctctggagagacctgtgtagcaacgctccccatccaacctaacagagcttgagaggaactgcagagaagaatgggagaaagtttgtagcatcaaacccaagaagacttgagactgtaatcgctgccaaaggtgcttcaacaaagtactgagtaaagggtctgaatacttatgtaaatgtaatatttctgtttgttatttgtaaacagtttttgctttgtcatta

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1149760 True 1073 lncRNA 0.47 2 68919495 68920707

Neighbor

gene id symbol gene type direction distance location
LOC110535100 LOC106580549 coding downstream 334002 68554386 ~ 68585493 (-)
LOC110536290 ccdc183 coding downstream 366581 68536798 ~ 68552914 (-)
LOC110535099 LOC106580537 coding downstream 414256 68445137 ~ 68505239 (-)
LOC110536288 rabl6 coding downstream 794624 68110512 ~ 68124871 (-)
imp4 LOC106580531 coding downstream 820690 68095565 ~ 68098805 (-)
LOC110536294 cssa24h9orf3 coding upstream 13246 68933953 ~ 68991741 (-)
LOC110535102 LOC106580556 coding upstream 183397 69104104 ~ 69187259 (-)
LOC110536298 tmem252 coding upstream 347593 69268300 ~ 69270450 (-)
LOC110536299 zswim6 coding upstream 386241 69306948 ~ 69395042 (-)
LOC110536301 NA coding upstream 479843 69400550 ~ 69404206 (-)
G1010794 NA non-coding downstream 103 68918464 ~ 68919392 (-)
G1010803 NA non-coding downstream 3183 68916097 ~ 68916312 (-)
G1010801 NA non-coding downstream 4581 68914594 ~ 68914914 (-)
G1010798 NA non-coding downstream 12463 68906594 ~ 68907032 (-)
G1010795 NA non-coding downstream 18754 68900523 ~ 68900741 (-)
G1010793 NA non-coding upstream 2704 68923411 ~ 68924667 (-)
G1010847 NA non-coding upstream 79736 69000443 ~ 69000648 (-)
G1010849 NA non-coding upstream 81597 69002304 ~ 69002525 (-)
G1010864 NA non-coding upstream 102226 69022933 ~ 69023132 (-)
G1010443 NA other downstream 231533 68687257 ~ 68687962 (-)
G1009720 NA other downstream 948167 67971071 ~ 67971328 (-)
G1007506 NA other downstream 2546546 66372642 ~ 66372949 (-)
G1006106 NA other downstream 3819939 65098960 ~ 65099556 (-)
G1005628 LOC106580457 other downstream 4555718 64360764 ~ 64363777 (-)
G1010922 NA other upstream 195800 69116507 ~ 69119486 (-)
G1011014 NA other upstream 384629 69305336 ~ 69306428 (-)
G1012814 NA other upstream 1963769 70884476 ~ 70890991 (-)
G1013669 NA other upstream 2576601 71497308 ~ 71515434 (-)
G1013960 NA other upstream 3075374 71996081 ~ 71996688 (-)

Expression


Co-expression Network