XLOC_002895 (BX548044.8)


Basic Information

Item Value
gene id XLOC_002895
gene name BX548044.8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 34059007 ~ 34067286 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005345
AGTATAAAGCATTTTGACGTAGCAGAAACTCTCATTAGCTTCTTTGGATGtctagtagttcagtactttctgcgATTCAACAGTACAGTGATAAAATGGCATTTTCAAAACTGATTAACCGTCTGAAGAAAGCGTTTGGTGTTAAGTGTGCGAACGAACAACCGTGTGAGCCACTCGAACCCACCGGCAGCACGACAGAGGATCACCGTCATCTGATGACCGATGACCCGGCCGTCGCTGCAGGAAAACAGGCAGGGagacagaaaaagaggaaaaTCAAATTGTCTCCCATCTTCTTCGCCTGTTTTTCCAGAAGAAGAGCTACTGTTGTTGATCAGCTATGTGTGCAGGAGATCCACGAACTTCACGCAGAGCCCATCAGTAGCTCTAAATTCTTCTGCACTGCTGTGAGCAACCTGGAGCTGGAAGTTCTCCAACCTCCAGCTCTTGATGCTCCAGCAGACGAAGACTTGGACTCTAAACCTGAAGTGAACAGCTTTGACTCTGCAGTGGTCATTGAGAACGACTCTGCAGAGCTTCACTTCACAGCAGACAACAAATCCTCCCTCAGTGAGGACAGCCTGGAGCAAGAGCTTGAAAGTCCTCCAAGTTCACCATCCGATGAGGACAATGAATCTCCAGTGAGCCAGCAGCTCATAACAGATGACATCTGTGACTCTGCCCTGGATGAAAACTCAAACCCTTTACCGGATCAGGTCTCACAAGAGGACTCTGCTGTGAAGTCTACAGCAGATGatgggacctgcttggacaataATGACATCAGCTGCCGCTACAAACTCGGAAAGCAGCTTGGTGAAGGAGGTTTCGGCTCCGTGTATGAGGGGATTCGCATACAGGATGGTCTGCAGGTGGCAGTTAAATTTGTCCAGAAGACCCCAAATATGCAAGATGTCAGCTCTtcatgtgaccaGCCACTTCCTCTAGAGATCACCTTGGCAAACATGGCCAGCGGTGGCTCCAGGTGTTCGAACATTATTCAGCTTCTGGACTGGCAGGTCTTTGAAAACCATTACGTCATGGTGATGGAGCGGCCTAGTCCAAGCATGGACCTGGAGGCATTCCTTGAAGTCAGCGGAGGAGTCCTCAGTGAGAAAACAGCACATACCATCATGAGGCAAGCTGTTTATGCGGCCAACGTGTGCTGTTACTGCGGGGTGTTCCACCGGGACATTAAGCTTCAAAACCTGCTGGTGAACCCCGACACACTGGAAGTCAAGCTGATCGACTTCGGGTGTGGAGACTTCATGATGGAATCAGCCTACAGTATCTTCTCTGGCACAGAAGCGTACATCCCGCCAGAGTTTTATGAAAAAGGATGCTACCGGGCCAAACCAGCGACGGTCTATTCTCTTGGGGTTCTTCTGTTCACAATGCTCCATGGAGAATTCCCATCAGCGTATGACCTGTACTACCTCCAACATGACTGgtccaaatttaccctctctcaagAATGCTGTGATATGATGAGGGCTTGTCTGCATGAGAATCCAGAGTGCAGAATTCCTCTAGAAGAGATGCCTTACCACGACTGGTCCATGCTGGAGTTCTGAGTCACATTAGCagaatgttttgtatatttgatttttgtacatgtctgtaataaagatatattttattgAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116394

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005345 True 1644 mRNA 0.48 7 34059007 34067286

Neighbor

gene id symbol gene type direction distance location
XLOC_002894 pimr149 coding downstream 12250 34043561 ~ 34046757 (-)
XLOC_002893 rfc3 coding downstream 25327 34021368 ~ 34033680 (-)
XLOC_002892 zar1l coding downstream 56822 33999869 ~ 34002185 (-)
XLOC_002891 BX569785.1 coding downstream 178643 33876131 ~ 33880364 (-)
XLOC_002890 NA coding downstream 394218 33663165 ~ 33664789 (-)
XLOC_002896 pimr144 coding upstream 19305 34086591 ~ 34107919 (-)
XLOC_002897 pimr150 coding upstream 53257 34120543 ~ 34150672 (-)
XLOC_002898 pimr145 coding upstream 104388 34171674 ~ 34223567 (-)
XLOC_002899 pimr148 coding upstream 119945 34187231 ~ 34200750 (-)
XLOC_002900 NA coding upstream 129496 34196782 ~ 34198566 (-)
XLOC_002885 dre-mir-130a non-coding downstream 681793 33377130 ~ 33377214 (-)
XLOC_002884 dre-mir-301a non-coding downstream 681921 33377001 ~ 33377086 (-)
XLOC_002883 dre-mir-454a non-coding downstream 682066 33376818 ~ 33376941 (-)
XLOC_002902 BX510654.1 non-coding upstream 259976 34327262 ~ 34327394 (-)
XLOC_002906 CT573139.2 non-coding upstream 883774 34951060 ~ 34959178 (-)
XLOC_002909 NA non-coding upstream 986995 35054281 ~ 35058444 (-)
XLOC_002912 BX465844.1 non-coding upstream 1092724 35160010 ~ 35164291 (-)

Expression


Co-expression Network