Gene
RNA
| Item | Value |
|---|---|
| gene id | G1011032 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 69326580 ~ 69327015 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger SWIM domain-containing protein 6-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1150018 | True | 436 | lncRNA | 0.53 | 1 | 69326580 | 69327015 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536297 | LOC106580555 | coding | upstream | 66663 | 69210550 ~ 69259917 (+) |
| LOC110536644 | LOC106580559 | coding | upstream | 117248 | 69207662 ~ 69209332 (+) |
| LOC110536296 | cbwd3 | coding | upstream | 120235 | 69191221 ~ 69206345 (+) |
| LOC118937380 | NA | coding | upstream | 402271 | 68918586 ~ 68924491 (+) |
| LOC110535101 | LOC106580561 | coding | upstream | 479247 | 68687221 ~ 68847333 (+) |
| LOC110536300 | LOC106580593 | coding | downstream | 71520 | 69398535 ~ 69400234 (+) |
| ercc8 | ercc8 | coding | downstream | 108304 | 69435319 ~ 69456823 (+) |
| LOC110536303 | LOC106580590 | coding | downstream | 144035 | 69471050 ~ 69484931 (+) |
| agpat9l | LOC106580584 | coding | downstream | 315074 | 69642089 ~ 69655067 (+) |
| LOC110536313 | LOC106580580 | coding | downstream | 370946 | 69696110 ~ 69705172 (+) |
| G1011031 | NA | non-coding | upstream | 617 | 69325727 ~ 69325963 (+) |
| G1011030 | NA | non-coding | upstream | 1211 | 69325168 ~ 69325369 (+) |
| G1011027 | NA | non-coding | upstream | 6017 | 69319426 ~ 69320563 (+) |
| G1011005 | NA | non-coding | upstream | 24895 | 69301362 ~ 69301685 (+) |
| G1011004 | NA | non-coding | upstream | 25449 | 69300920 ~ 69301131 (+) |
| G1011033 | NA | non-coding | downstream | 182 | 69327197 ~ 69327737 (+) |
| G1011034 | NA | non-coding | downstream | 17117 | 69344132 ~ 69344447 (+) |
| G1011039 | NA | non-coding | downstream | 25022 | 69352037 ~ 69352270 (+) |
| G1011109 | LOC106580587 | non-coding | downstream | 196405 | 69523420 ~ 69524131 (+) |
| G1011315 | LOC106580585 | non-coding | downstream | 263578 | 69590593 ~ 69592141 (+) |
| LOC110536291 | LOC106580540 | other | upstream | 739538 | 68584627 ~ 68587134 (+) |
| G1008017 | NA | other | upstream | 2444329 | 66881799 ~ 66882251 (+) |
| LOC110536267 | LOC106580513 | other | upstream | 2528363 | 66774135 ~ 66798230 (+) |
| G1007556 | NA | other | upstream | 2913645 | 66412574 ~ 66412935 (+) |
| G1011336 | NA | other | downstream | 306486 | 69633501 ~ 69633876 (+) |
| sb:cb288 | NA | other | downstream | 378419 | 69705334 ~ 69711411 (+) |
| LOC110536323 | LOC106580573 | other | downstream | 577933 | 69904948 ~ 69917078 (+) |
| LOC110536331 | LOC106580567 | other | downstream | 674454 | 70001416 ~ 70009325 (+) |
