Gene
RNA
| Item | Value |
|---|---|
| gene id | G1011357 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 69675650 ~ 69676452 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1150407 | True | 415 | lncRNA | 0.39 | 2 | 69675650 | 69676452 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| agpat9l | LOC106580584 | coding | upstream | 20583 | 69642089 ~ 69655067 (+) |
| LOC110536303 | LOC106580590 | coding | upstream | 190719 | 69471050 ~ 69484931 (+) |
| ercc8 | ercc8 | coding | upstream | 218827 | 69435319 ~ 69456823 (+) |
| LOC110536300 | LOC106580593 | coding | upstream | 275416 | 69398535 ~ 69400234 (+) |
| LOC110536297 | LOC106580555 | coding | upstream | 415733 | 69210550 ~ 69259917 (+) |
| LOC110536313 | LOC106580580 | coding | downstream | 21509 | 69696110 ~ 69705172 (+) |
| sb:cb288 | NA | coding | downstream | 28882 | 69705334 ~ 69711411 (+) |
| pold2 | pold2 | coding | downstream | 50315 | 69726767 ~ 69738390 (+) |
| LOC110536321 | LOC106580575 | coding | downstream | 222109 | 69898561 ~ 69903158 (+) |
| LOC110536323 | LOC106580573 | coding | downstream | 228534 | 69904948 ~ 69917078 (+) |
| G1011356 | NA | non-coding | upstream | 1176 | 69665603 ~ 69674474 (+) |
| G1011353 | NA | non-coding | upstream | 11153 | 69659281 ~ 69664497 (+) |
| G1011352 | NA | non-coding | upstream | 17811 | 69657575 ~ 69657839 (+) |
| G1011340 | NA | non-coding | upstream | 39269 | 69636169 ~ 69636381 (+) |
| G1011339 | NA | non-coding | upstream | 39813 | 69635619 ~ 69635837 (+) |
| G1011360 | NA | non-coding | downstream | 2921 | 69679373 ~ 69679584 (+) |
| G1011402 | NA | non-coding | downstream | 81662 | 69758114 ~ 69758614 (+) |
| G1011438 | NA | non-coding | downstream | 139903 | 69816355 ~ 69848623 (+) |
| G1011336 | NA | other | upstream | 41774 | 69633501 ~ 69633876 (+) |
| LOC110535101 | LOC106580561 | other | upstream | 850650 | 68687221 ~ 68847333 (+) |
| LOC110536291 | LOC106580540 | other | upstream | 1088608 | 68584627 ~ 68587134 (+) |
| G1008017 | NA | other | upstream | 2793399 | 66881799 ~ 66882251 (+) |
| LOC110536331 | LOC106580567 | other | downstream | 325017 | 70001416 ~ 70009325 (+) |
| G1011531 | NA | other | downstream | 342651 | 70019103 ~ 70019906 (+) |
| LOC110536338 | LOC106580595 | other | downstream | 452830 | 70128401 ~ 70134490 (+) |
