G1011623


Basic Information

Item Value
gene id G1011623
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 69709686 ~ 69711373 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1150753
GACTTAAGACTTGAATTTCTTAGAATCATCTAATTTTGTATGACTTCAAGACCTCCCACTAACACAATAATTTGTTAGTATTTGACAGAGACAATTTTGAGCTCATTTTAAACCTCTCCTTTCCTAGTGTTCTGTTGCATAATTTGCATTGTTCGTTAATCAGTGAATGTACATTCCTCCCAACACTAAGTAGTAACTCGGGTGTAAATTCAGATTTAACTGATAAAAGTAAAAAAGGGAAAACTCAGTAAAAGTGCAAGAACACAAATCACAGTTTAATGAAAGGAACAGTAAGTCACATCCTGAGGAAAAGTAACATGACAAAACCTGGATATCATAAGGCCATTAACTCCAGCTCAATCATTCACCTAAAGCATCATATCACATGCACAACCAAATATATAAAGTATTAGCAAATTTCCCATTCATTATCACTTTCCTTTCAAACACATGTAGTCAACCCTAATCAAAATCTACACACACTTTCAcccaaacagaagaaaaaaaaacatacccaCATGTTTGCCAGGCCAGTAGGCTTGTTGACCGATAGGAAGAACAGTGACCTGTGCTGCCTCCTTCCTCAGTAGTACAGATTTCACTGTCAACTGTCAGTGACCTGCAGACAACAGTATAGCTACGCTTCAGTTAAAGTCAGCATCTCACGCAGGCATAGCACTGTGGCATACAGTGGATCCTAGAATCATTTAGATCAGGCTCTCTCAAAGTATTGGGGTCCGGCACCTCTTTTGTGATAGCAAATATATAAAGGGACCCACTCAATCAGAACAACTCGAGTGAGAAAAATAGCATACACGGTGTTTTACTATGACTTCAGTGTATGGCCGGACGAACCAAGGCTCGGTCCTGGGGAGGAACATTTTAAAAGGCCAGCCTCTTGACATATTTTGTCATGGGGCAAAGAGTTTGTGTTGTTGCGGCTTTAGCACTAAtattctgcaattctacacattttcccatGAGACAGAAAGAAAACTGCAGtttaaaatatatacacacacactatgggtTATTGAGTTGAAAAATGTATAATTGGTGAGTACTGTAGATGccaatatccctgtgagcctcccaggcccacGTTGTCCAGGGTTTAAGAACATAAATTGTATAttaataatatgacattttattgtatttacaCTCTAAACTAATTCAACAGATCTCTTGGCAAAAATGTGTTTGACCTGTTAtttttttacataCAAAAATGTTTACAAGTTTGATGGGTCTGCAGACCCCAGCTTAACTGATTTAGATTGTTTGTTCATGCTCTCTGACACACTTCAGTTGGATCCTTTAGCCATTTGAGTGGATCCTCTTAAGGCAATTTAGAAGATCCTTTTAGATCCATTTGACCGGATCCTTAGATTCCGGTCCATCCTCTGACCATGATAAGCTAGATCCATAATTATGCCATCCCCTAGCTCTATGCAAATGTTTCTGAATCTCCATTTCCTCTCTGATGTCCAGGAACATCCTGATGAGAGACTCAAGTCAGTATGAGTGGATCTTTTCGGGTCCGTTTGACTGGCCGGGGTTTGATGCAGGAGTTGGATCCTCTGGCCAGATGGCCTAGATGAGATCCTGATTGTCAGTCAGCATAGTTGGCTCCTCTTGTCTTGAAccctcaccctcctcttctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1150753 True 1667 lncRNA 0.40 2 69709686 69711373

Neighbor

gene id symbol gene type direction distance location
LOC110536311 LOC106580581 coding downstream 35228 69666111 ~ 69674458 (-)
LOC110536312 LOC106580582 coding downstream 44557 69659414 ~ 69665129 (-)
LOC110536308 LOC106580585 coding downstream 82596 69581843 ~ 69627090 (-)
LOC110535103 fgf10 coding downstream 136057 69559666 ~ 69573629 (-)
LOC110536307 paip1 coding downstream 153695 69544805 ~ 69555991 (-)
LOC110536316 aebp1 coding upstream 26821 69738194 ~ 69770129 (-)
LOC110536317 LOC106580578 coding upstream 80038 69791411 ~ 69805945 (-)
LOC110535106 LOC106580600 coding upstream 110158 69821531 ~ 69823285 (-)
LOC110536318 LOC106580577 coding upstream 135850 69847223 ~ 69892082 (-)
LOC110536320 LOC106585172 coding upstream 184243 69895616 ~ 69898166 (-)
G1011619 NA non-coding downstream 4724 69704297 ~ 69704962 (-)
G1011618 NA non-coding downstream 14953 69694524 ~ 69694733 (-)
G1011616 NA non-coding downstream 18497 69690893 ~ 69691189 (-)
G1011588 NA non-coding downstream 70311 69639152 ~ 69639375 (-)
G1011587 NA non-coding downstream 75056 69634163 ~ 69634630 (-)
G1011626 NA non-coding upstream 4078 69715451 ~ 69715670 (-)
G1011657 NA non-coding upstream 88703 69800076 ~ 69892958 (-)
G1011700 NA non-coding upstream 198995 69910368 ~ 69911768 (-)
G1011719 NA non-coding upstream 224573 69935946 ~ 69938863 (-)
G1011720 NA non-coding upstream 229478 69940851 ~ 69942377 (-)
G1011014 NA other downstream 403258 69305336 ~ 69306428 (-)
G1010922 NA other downstream 590200 69116507 ~ 69119486 (-)
G1010443 NA other downstream 1021724 68687257 ~ 68687962 (-)
G1009720 NA other downstream 1738358 67971071 ~ 67971328 (-)
G1007506 NA other downstream 3336737 66372642 ~ 66372949 (-)
G1012814 NA other upstream 1173103 70884476 ~ 70890991 (-)
G1013669 NA other upstream 1785935 71497308 ~ 71515434 (-)
G1013960 NA other upstream 2284708 71996081 ~ 71996688 (-)
G1014411 NA other upstream 2647912 72359285 ~ 72359505 (-)
G1014639 NA other upstream 2735281 72446654 ~ 72449340 (-)

Expression


Co-expression Network