G1011700


Basic Information

Item Value
gene id G1011700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 69910368 ~ 69911768 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1150839
gaaagagggagaggtggggtggtaaagctgggaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagccaccactaacactgagtggctgctgccaacacactgacacaggacaccggataagacaggagaaatactccagatataacagactgaccctagccccccagcacaaactactgcagcataaatactgaaggctgagagaggaggggtcgggagacactgcgGCCCCATCcaacgatacccccagacagggccaaacaggcaggatataactccacccactttgccaaagcacagcccccacaccactagagggatatcttcaaccaccaacttaccatcctgagacaaggccgagtataacccacaaagatctccgccacggcacaacccaaggggggggggcgccaacccggacaggaagatcacatcggTGACTTAACCCACTCAAGtggcgcacccctcctagggatggcatgaaagagcaccagtatgccagtgactcagcccctgtaatcgggttagaggcagagaatcccagtggagagaggggaacaggccaggcagagacagcaagggcggtccGTCGCTCCattgcctttccattcaccttcataCTCctaggccagactacactcaatcataggacctactgaagagatgagtcttcaataaagacttgaaggttgagaccgagtctgcgtgaTTTAATATTGAGATAAAACGGATGGATTGGACCTTTAAAGGCCAGTAGAggatagtgtcacgccctggtcttagtattttgtgttttctttattattttggtcaggccagggtgtgacatgggtttattatgtggtgtgttttgtcttggggttttcgtaggtattgggattgtggcttagtggggttatctagtatagtctatggctgtctggagtggttctcaatcagaggcaggtgtttatcgttgtctctgattgggaaccatatttaggcagccatattctttgagtgtttggtgggtgattgttcctgtctctgtgttagtttgcaccagataggctgtttcaGTTTTTCACGTtgattgttttgtattatgttaatgTTTGAGttttttctttattaaagaacatgaacaCCAActacgccgcattttggtccgatccttgctacacctcctcttcagaggaggagataggctCCAGACAAGACTGTGAATTTTGACCTGCTGAGTGAATAGGCTATTAATTTAAGGTGTCACCTTTTCATATAGGCTAACCCTGTGCAATTAGAAGAGACATGCATTGAAatattaaattacatttaaattcaAAGCCTTTACAGATGAACCGACGCCATGATGTTGAGATGTGGAGGTACAGTATTTATGCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1150839 True 1401 lncRNA 0.47 1 69910368 69911768

Neighbor

gene id symbol gene type direction distance location
LOC110536320 LOC106585172 coding downstream 12202 69895616 ~ 69898166 (-)
LOC110536318 LOC106580577 coding downstream 18286 69847223 ~ 69892082 (-)
LOC110535106 LOC106580600 coding downstream 87083 69821531 ~ 69823285 (-)
LOC110536317 LOC106580578 coding downstream 104423 69791411 ~ 69805945 (-)
LOC110536316 aebp1 coding downstream 140239 69738194 ~ 69770129 (-)
LOC110536328 LOC106580568 coding upstream 63120 69974888 ~ 69983058 (-)
LOC110536645 NA coding upstream 84560 69996328 ~ 69999946 (-)
LOC110536332 LOC106580566 coding upstream 114440 70026208 ~ 70030420 (-)
smyd1b smyd1b coding upstream 188354 70100122 ~ 70113042 (-)
LOC110536342 efna5 coding upstream 645241 70557009 ~ 70744135 (-)
G1011657 NA non-coding downstream 17410 69800076 ~ 69892958 (-)
G1011626 NA non-coding downstream 194698 69715451 ~ 69715670 (-)
G1011623 NA non-coding downstream 198995 69709686 ~ 69711373 (-)
G1011619 NA non-coding downstream 205406 69704297 ~ 69704962 (-)
G1011618 NA non-coding downstream 215635 69694524 ~ 69694733 (-)
G1011719 NA non-coding upstream 24178 69935946 ~ 69938863 (-)
G1011720 NA non-coding upstream 29083 69940851 ~ 69942377 (-)
G1011721 NA non-coding upstream 31231 69942999 ~ 69943236 (-)
G1011730 NA non-coding upstream 43868 69955636 ~ 69955925 (-)
G1011738 NA non-coding upstream 58084 69969852 ~ 69971225 (-)
G1011014 NA other downstream 603940 69305336 ~ 69306428 (-)
G1010922 NA other downstream 790882 69116507 ~ 69119486 (-)
G1010443 NA other downstream 1222406 68687257 ~ 68687962 (-)
G1009720 NA other downstream 1939040 67971071 ~ 67971328 (-)
G1007506 NA other downstream 3537419 66372642 ~ 66372949 (-)
G1012814 NA other upstream 972708 70884476 ~ 70890991 (-)
G1013669 NA other upstream 1585540 71497308 ~ 71515434 (-)
G1013960 NA other upstream 2084313 71996081 ~ 71996688 (-)
G1014411 NA other upstream 2447517 72359285 ~ 72359505 (-)
G1014639 NA other upstream 2534886 72446654 ~ 72449340 (-)

Expression


Co-expression Network