G1011720


Basic Information

Item Value
gene id G1011720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 69940851 ~ 69942377 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1150869
ttttggtacccttccccagatctgtgccttgacacaatcctgtctcggacttCTAGGACAAATCCTTTgaacttggtttttgctctgacatgcactgtcaactgtggaaccttatatagacaggtgtatgcctttacaaatcatgtccaatcaatttaatttaccacaggtggacttcagtcaagttgtataaacatctcaaggatgatcaatggaaacaggatgcacctgagctcaatttcgagtctcatagcagatggtctgaatacttatgtaaagacatttattttattttgtatttttttatctcacctttctttaaccaggtaggcaagttgagaacaagttctggccaagataaagcaaagcagttcgacacatacaacgacacagagttacacatggagtaaaagtcaataatacagtataaacaagtctatatacaatgtaagcaagtgaggtgagataagggaggtaaaggcaaaaaaaggccatggtggcgaagtaaatacaatatagcaagtaaaacactggaatggttgatttgcagtggaagaatgtgcaaagtagagatagaaataatggggtgcaaaggagcaaaataaataaataaatacagtagggaaagaggtagttgtttgggctaaattatagatgtgctatgtacaggtgcagtaatctgtgagctgctctgacagctggtgcttaaagctagtgagggagataagtgtttccagtttcagagatgtttgtagttcgttccagtcattggcagcagagaactggaaggagaggcggccaaaggaagaattggttttgggggtgaccagagatatacctgctggagcgcgtgctacaggtgggtgctgatatggtgaccagcgagctaagataaggggggactttacctagcagggtcttgtagatgacctggagccagtgggtttggcgacaagtatgaagcgagggccaaccaacaagagcgtacaggtcgcagtggtgggtagtatatggggctttggtgacaaaacagatggcactgtgatagactacattctatttattgagtagggtattggaggctattttgtaaatgacatcgccgaagtcgaggattggtaagatggtcagttttacgagtgtatgtttggcagcatgagtgaaggacgctttgttgcgaaatatgaagccaattctagatttaactttggattggagatgtttgatgtgagtctgaaaggagagtttacagtctaaccagacacctaggtattttttagttgtccacgtattctaagtcagagccgtccagactagtgatgttggacaggcgggcaggtgcaggcagcgatcggttgaagagcatgcatttagttttacttgtatttaagagtaattggaggccacagaaggagagttgtatggcattgaagctcgtctggagggttgttaactcagtgtccaaagaatggacagaagtatacagaatggtgtcgtctgcgtagaggtggatcagagacttaccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1150869 True 1527 lncRNA 0.43 1 69940851 69942377

Neighbor

gene id symbol gene type direction distance location
LOC110536320 LOC106585172 coding downstream 42685 69895616 ~ 69898166 (-)
LOC110536318 LOC106580577 coding downstream 48769 69847223 ~ 69892082 (-)
LOC110535106 LOC106580600 coding downstream 117566 69821531 ~ 69823285 (-)
LOC110536317 LOC106580578 coding downstream 134906 69791411 ~ 69805945 (-)
LOC110536316 aebp1 coding downstream 170722 69738194 ~ 69770129 (-)
LOC110536328 LOC106580568 coding upstream 32511 69974888 ~ 69983058 (-)
LOC110536645 NA coding upstream 53951 69996328 ~ 69999946 (-)
LOC110536332 LOC106580566 coding upstream 83831 70026208 ~ 70030420 (-)
smyd1b smyd1b coding upstream 157745 70100122 ~ 70113042 (-)
LOC110536342 efna5 coding upstream 614632 70557009 ~ 70744135 (-)
G1011719 NA non-coding downstream 1988 69935946 ~ 69938863 (-)
G1011700 NA non-coding downstream 29083 69910368 ~ 69911768 (-)
G1011657 NA non-coding downstream 47893 69800076 ~ 69892958 (-)
G1011626 NA non-coding downstream 225181 69715451 ~ 69715670 (-)
G1011623 NA non-coding downstream 229478 69709686 ~ 69711373 (-)
G1011721 NA non-coding upstream 622 69942999 ~ 69943236 (-)
G1011730 NA non-coding upstream 13259 69955636 ~ 69955925 (-)
G1011738 NA non-coding upstream 27475 69969852 ~ 69971225 (-)
G1011739 NA non-coding upstream 29878 69972255 ~ 69972477 (-)
G1011740 NA non-coding upstream 30110 69972487 ~ 69972764 (-)
G1011014 NA other downstream 634423 69305336 ~ 69306428 (-)
G1010922 NA other downstream 821365 69116507 ~ 69119486 (-)
G1010443 NA other downstream 1252889 68687257 ~ 68687962 (-)
G1009720 NA other downstream 1969523 67971071 ~ 67971328 (-)
G1007506 NA other downstream 3567902 66372642 ~ 66372949 (-)
G1012814 NA other upstream 942099 70884476 ~ 70890991 (-)
G1013669 NA other upstream 1554931 71497308 ~ 71515434 (-)
G1013960 NA other upstream 2053704 71996081 ~ 71996688 (-)
G1014411 NA other upstream 2416908 72359285 ~ 72359505 (-)
G1014639 NA other upstream 2504277 72446654 ~ 72449340 (-)

Expression


Co-expression Network