Gene
RNA
| Item | Value |
|---|---|
| gene id | G1011513 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 69955296 ~ 69955531 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1150608 | True | 236 | lncRNA | 0.43 | 1 | 69955296 | 69955531 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536326 | LOC106580571 | coding | upstream | 2643 | 69944662 ~ 69952653 (+) |
| rnf122 | LOC106580572 | coding | upstream | 18877 | 69917694 ~ 69936419 (+) |
| LOC110536323 | LOC106580573 | coding | upstream | 38218 | 69904948 ~ 69917078 (+) |
| LOC110536321 | LOC106580575 | coding | upstream | 52138 | 69898561 ~ 69903158 (+) |
| pold2 | pold2 | coding | upstream | 216906 | 69726767 ~ 69738390 (+) |
| LOC110536327 | LOC106580570 | coding | downstream | 1000 | 69956531 ~ 69971816 (+) |
| LOC110536329 | LOC106580569 | coding | downstream | 27647 | 69983168 ~ 69995816 (+) |
| LOC110536331 | LOC106580567 | coding | downstream | 45885 | 70001416 ~ 70009325 (+) |
| trnal-caa-3 | NA | coding | downstream | 87944 | 70043475 ~ 70043586 (+) |
| trnal-caa-4 | NA | coding | downstream | 88406 | 70043937 ~ 70044048 (+) |
| G1011487 | NA | non-coding | upstream | 60636 | 69894280 ~ 69894660 (+) |
| G1011438 | NA | non-coding | upstream | 106673 | 69816355 ~ 69848623 (+) |
| G1011402 | NA | non-coding | upstream | 196682 | 69758114 ~ 69758614 (+) |
| sb:cb288 | NA | non-coding | upstream | 243963 | 69705334 ~ 69711411 (+) |
| LOC110536313 | LOC106580580 | non-coding | upstream | 250128 | 69696110 ~ 69705172 (+) |
| G1011518 | NA | non-coding | downstream | 18346 | 69973877 ~ 69974104 (+) |
| G1011509 | LOC106580568 | non-coding | downstream | 19365 | 69974896 ~ 69976598 (+) |
| G1011519 | NA | non-coding | downstream | 21647 | 69977178 ~ 69977512 (+) |
| G1011526 | NA | non-coding | downstream | 43680 | 69999211 ~ 69999540 (+) |
| G1011336 | NA | other | upstream | 321420 | 69633501 ~ 69633876 (+) |
| LOC110536300 | LOC106580593 | other | upstream | 555062 | 69398535 ~ 69400234 (+) |
| LOC110535101 | LOC106580561 | other | upstream | 1130296 | 68687221 ~ 68847333 (+) |
| G1011531 | NA | other | downstream | 63572 | 70019103 ~ 70019906 (+) |
| LOC110536338 | LOC106580595 | other | downstream | 173751 | 70128401 ~ 70134490 (+) |
| G1012975 | NA | other | downstream | 1088728 | 71044259 ~ 71044604 (+) |
| G1013375 | LOC106580618 | other | downstream | 1517895 | 71473426 ~ 71474631 (+) |
