XLOC_028956



Basic Information


Item Value
gene id XLOC_028956
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 37606409 ~ 37607499 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00058268
cctagtgaagcccttcaactttggccaaggagtctacgtttggatgtgagtgGAAGCATGCAGAattactttgcaagtctgtttgcttagaccgctcggccacgctatcttgccaagctgctttcccAGAGCAGTTTTTggaccaacttgtttcaagtagcgcaacagcgctgggaaatcagttgaatgcattgctggagctcctccacaaagaaagagagctgcttaataccagcttaggaagcactcccaccttcctgtcaaccacagtactgtctctatttgagcacacctcaaggcatttgaagtctactccatacggcagccagctgcgatacatttaagcacctgattacaagattgagaaatgTCCATTGCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00058268 True 379 lncRNA 0.47 2 37606409 37607499

Neighbor


gene id symbol gene type direction distance location
XLOC_028955 znf1100 coding downstream 19299 37577527 ~ 37587110 (-)
XLOC_028954 si:dkey-106c17.2 coding downstream 127010 37476367 ~ 37479399 (-)
XLOC_028953 NA coding downstream 225993 37379137 ~ 37380416 (-)
XLOC_028952 NA coding downstream 272616 37328527 ~ 37333793 (-)
XLOC_028951 NA coding downstream 333366 37272018 ~ 37273043 (-)
XLOC_028957 si:dkey-3p4.1 coding upstream 68664 37676163 ~ 37696534 (-)
XLOC_028958 znf1139 coding upstream 93977 37701476 ~ 37708661 (-)
XLOC_028959 BX510935.2 coding upstream 122620 37730119 ~ 37730282 (-)
XLOC_028960 BX510935.1 coding upstream 123930 37731429 ~ 37731577 (-)
XLOC_028961 si:dkey-207l24.2 coding upstream 153429 37760928 ~ 37766174 (-)
XLOC_028950 NA non-coding downstream 335179 37267210 ~ 37271230 (-)
XLOC_028945 NA non-coding downstream 434104 36764140 ~ 37172305 (-)
XLOC_028962 NA non-coding upstream 172357 37779856 ~ 37783475 (-)
XLOC_028963 CR759843.4 non-coding upstream 413975 38021474 ~ 38021637 (-)
XLOC_028964 CR759843.3 non-coding upstream 415529 38023028 ~ 38023176 (-)

Expression



Co-expression Network