G1011519


Basic Information

Item Value
gene id G1011519
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 69977178 ~ 69977512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1150614
GGGCCCATTTCAAGTTTacataatctgtttttggacgccgattatggccgattacattgcattccacataatcactagttaacctagtaatatcgtcaaccatgtgtagttaactagcttatcctgcattgcatataatcaatgcggtgcctgataatttatcatcgaatcacagcctacttcgccaaacgagGGATGATGTaacaaaagcacaatcgttgcacgaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1150614 True 230 lncRNA 0.40 2 69977178 69977512

Neighbor

gene id symbol gene type direction distance location
LOC110536327 LOC106580570 coding upstream 5362 69956531 ~ 69971816 (+)
LOC110536326 LOC106580571 coding upstream 24525 69944662 ~ 69952653 (+)
rnf122 LOC106580572 coding upstream 40759 69917694 ~ 69936419 (+)
LOC110536323 LOC106580573 coding upstream 60100 69904948 ~ 69917078 (+)
LOC110536321 LOC106580575 coding upstream 74020 69898561 ~ 69903158 (+)
LOC110536329 LOC106580569 coding downstream 5666 69983168 ~ 69995816 (+)
LOC110536331 LOC106580567 coding downstream 23904 70001416 ~ 70009325 (+)
trnal-caa-3 NA coding downstream 65963 70043475 ~ 70043586 (+)
trnal-caa-4 NA coding downstream 66425 70043937 ~ 70044048 (+)
trnal-caa-5 NA coding downstream 66856 70044368 ~ 70044479 (+)
G1011509 LOC106580568 non-coding upstream 580 69974896 ~ 69976598 (+)
G1011518 NA non-coding upstream 3074 69973877 ~ 69974104 (+)
G1011513 NA non-coding upstream 21647 69955296 ~ 69955531 (+)
G1011487 NA non-coding upstream 82518 69894280 ~ 69894660 (+)
G1011438 NA non-coding upstream 128555 69816355 ~ 69848623 (+)
G1011526 NA non-coding downstream 21699 69999211 ~ 69999540 (+)
G1011528 NA non-coding downstream 36634 70014146 ~ 70014995 (+)
trnal-caa-28 NA non-coding downstream 79492 70056987 ~ 70057327 (+)
G1011540 NA non-coding downstream 80028 70057540 ~ 70062206 (+)
sb:cb288 NA other upstream 265845 69705334 ~ 69711411 (+)
G1011336 NA other upstream 343302 69633501 ~ 69633876 (+)
LOC110536300 LOC106580593 other upstream 576944 69398535 ~ 69400234 (+)
LOC110535101 LOC106580561 other upstream 1152178 68687221 ~ 68847333 (+)
G1011531 NA other downstream 41591 70019103 ~ 70019906 (+)
LOC110536338 LOC106580595 other downstream 151770 70128401 ~ 70134490 (+)
G1012975 NA other downstream 1066747 71044259 ~ 71044604 (+)
G1013375 LOC106580618 other downstream 1495914 71473426 ~ 71474631 (+)

Expression


Co-expression Network