G1011531


Basic Information

Item Value
gene id G1011531
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 70019103 ~ 70019906 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1150637
gtcctgagagacatgctgaacatctttgttttcgtttaccttgatgatatcctgattttttcaccgtcactccagattcatgttcagcacgttcgacgtgtcctccagcgccttttagagaattgtctttttgtgaaggctgagaagtgcacttttcatgcctcctccgtcacatttctcggttctgttatttccgctgaaggcattaagatggatcccgctaaggtccaggctgtcattgattggcccgtccctaagtcacgcgtcgagctgcagcgctttctcggcttcgcgaacttctatcgtcgtttcatctgtaatttcggtcaggtggcagctcctctcacagcccttacttctgtcaagacgtgctttaagtggtccgtttccgcccagggagcttttgatctcctcaagaatcgttttacatccgctcctatccttgttacacctgacgtctctagacagttcgtggtcgaggttgacgcgtcagaggtgggcgtgggagccattctttctcagcgctccctctctgacgacaaggtccacccttgcgcgtatttttctcatcgcctgtcgccgtcggaacgtaattatgatgtgggaaaccgcgaactgctcgccatccggttagccctaggcgaatggcgacagtggttggagggggcgaccgttccttttgtcgtttggactgaccataggaaccttgagtacatccgttctgccaaacgacttaatgcgcgtcaggcgcgttgggcgctgtttttcgctcgtttcgagttcgtgatttcttatcgtccgggc

Function

NR:

description
Retrotransposable element Tf2 protein type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1150637 True 804 TUCP 0.52 1 70019103 70019906

Neighbor

gene id symbol gene type direction distance location
LOC110536331 LOC106580567 coding upstream 9783 70001416 ~ 70009325 (+)
LOC110536329 LOC106580569 coding upstream 23287 69983168 ~ 69995816 (+)
LOC110536327 LOC106580570 coding upstream 47287 69956531 ~ 69971816 (+)
LOC110536326 LOC106580571 coding upstream 66450 69944662 ~ 69952653 (+)
rnf122 LOC106580572 coding upstream 82684 69917694 ~ 69936419 (+)
trnal-caa-3 NA coding downstream 23569 70043475 ~ 70043586 (+)
trnal-caa-4 NA coding downstream 24031 70043937 ~ 70044048 (+)
trnal-caa-5 NA coding downstream 24462 70044368 ~ 70044479 (+)
trnal-caa-6 NA coding downstream 24914 70044820 ~ 70044931 (+)
trnal-caa-7 NA coding downstream 25355 70045261 ~ 70045372 (+)
G1011528 NA non-coding upstream 4108 70014146 ~ 70014995 (+)
G1011526 NA non-coding upstream 19563 69999211 ~ 69999540 (+)
G1011519 NA non-coding upstream 41591 69977178 ~ 69977512 (+)
G1011509 LOC106580568 non-coding upstream 42505 69974896 ~ 69976598 (+)
trnal-caa-28 NA non-coding downstream 37098 70056987 ~ 70057327 (+)
G1011540 NA non-coding downstream 37634 70057540 ~ 70062206 (+)
trnal-caa-99 NA non-coding downstream 71777 70091666 ~ 70091961 (+)
G1011550 NA non-coding downstream 76261 70096167 ~ 70096457 (+)
G1011551 NA non-coding downstream 80102 70100008 ~ 70124758 (+)
LOC110536323 LOC106580573 other upstream 108856 69904948 ~ 69917078 (+)
sb:cb288 NA other upstream 307770 69705334 ~ 69711411 (+)
G1011336 NA other upstream 385227 69633501 ~ 69633876 (+)
LOC110536300 LOC106580593 other upstream 618869 69398535 ~ 69400234 (+)
LOC110536338 LOC106580595 other downstream 109376 70128401 ~ 70134490 (+)
G1012975 NA other downstream 1024353 71044259 ~ 71044604 (+)
G1013375 LOC106580618 other downstream 1453520 71473426 ~ 71474631 (+)
LOC110536353 LOC106580623 other downstream 1775522 71738585 ~ 71797315 (+)
G1013617 NA other downstream 1818432 71838302 ~ 71840882 (+)

Expression


Co-expression Network