Gene
RNA
| Item | Value |
|---|---|
| gene id | G1011551 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 70100008 ~ 70124758 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1150663 | True | 885 | lncRNA | 0.37 | 2 | 70100008 | 70124758 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnal-caa-104 | NA | coding | upstream | 5066 | 70094831 ~ 70094942 (+) |
| trnal-caa-103 | NA | coding | upstream | 5522 | 70094375 ~ 70094486 (+) |
| trnal-caa-102 | NA | coding | upstream | 6866 | 70093031 ~ 70093142 (+) |
| trnal-caa-101 | NA | coding | upstream | 7337 | 70092560 ~ 70092671 (+) |
| trnal-caa-100 | NA | coding | upstream | 7790 | 70092107 ~ 70092218 (+) |
| LOC110536338 | LOC106580595 | coding | downstream | 3643 | 70128401 ~ 70134490 (+) |
| LOC110536339 | nim1k | coding | downstream | 21331 | 70146089 ~ 70167439 (+) |
| LOC110536340 | LOC106580597 | coding | downstream | 50173 | 70174931 ~ 70181550 (+) |
| LOC110536341 | ga45g | coding | downstream | 59443 | 70184201 ~ 70186238 (+) |
| prxl2c | aaed1 | coding | downstream | 1262010 | 71386768 ~ 71388869 (+) |
| G1011550 | NA | non-coding | upstream | 3551 | 70096167 ~ 70096457 (+) |
| trnal-caa-99 | NA | non-coding | upstream | 8047 | 70091666 ~ 70091961 (+) |
| G1011540 | NA | non-coding | upstream | 37802 | 70057540 ~ 70062206 (+) |
| trnal-caa-28 | NA | non-coding | upstream | 42681 | 70056987 ~ 70057327 (+) |
| G1011528 | NA | non-coding | upstream | 85013 | 70014146 ~ 70014995 (+) |
| G1011797 | NA | non-coding | downstream | 22500 | 70147258 ~ 70147459 (+) |
| G1011802 | NA | non-coding | downstream | 26522 | 70151280 ~ 70151486 (+) |
| G1011803 | NA | non-coding | downstream | 27821 | 70152579 ~ 70152835 (+) |
| G1011839 | NA | non-coding | downstream | 90426 | 70215184 ~ 70215424 (+) |
| G1011531 | NA | other | upstream | 80102 | 70019103 ~ 70019906 (+) |
| LOC110536331 | LOC106580567 | other | upstream | 90683 | 70001416 ~ 70009325 (+) |
| LOC110536323 | LOC106580573 | other | upstream | 189761 | 69904948 ~ 69917078 (+) |
| sb:cb288 | NA | other | upstream | 388675 | 69705334 ~ 69711411 (+) |
| G1011336 | NA | other | upstream | 466132 | 69633501 ~ 69633876 (+) |
| G1012975 | NA | other | downstream | 919501 | 71044259 ~ 71044604 (+) |
| G1013375 | LOC106580618 | other | downstream | 1348668 | 71473426 ~ 71474631 (+) |
| LOC110536353 | LOC106580623 | other | downstream | 1670670 | 71738585 ~ 71797315 (+) |
| G1013617 | NA | other | downstream | 1713580 | 71838302 ~ 71840882 (+) |
