Gene
RNA
| Item | Value |
|---|---|
| gene id | G1012227 |
| gene name | LOC106582599 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 70463784 ~ 70464015 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106582599 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1151401 | True | 232 | lncRNA | 0.52 | 1 | 70463784 | 70464015 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| smyd1b | smyd1b | coding | downstream | 350742 | 70100122 ~ 70113042 (-) |
| LOC110536332 | LOC106580566 | coding | downstream | 433364 | 70026208 ~ 70030420 (-) |
| LOC110536645 | NA | coding | downstream | 463838 | 69996328 ~ 69999946 (-) |
| LOC110536328 | LOC106580568 | coding | downstream | 480726 | 69974888 ~ 69983058 (-) |
| LOC110536320 | LOC106585172 | coding | downstream | 565618 | 69895616 ~ 69898166 (-) |
| LOC110536342 | efna5 | coding | upstream | 92994 | 70557009 ~ 70744135 (-) |
| LOC110536344 | habp4 | coding | upstream | 944339 | 71408354 ~ 71411778 (-) |
| LOC110536346 | slc35d2 | coding | upstream | 967823 | 71431838 ~ 71442390 (-) |
| LOC110536347 | NA | coding | upstream | 981732 | 71445747 ~ 71452891 (-) |
| ubox5 | LOC106580617 | coding | upstream | 995321 | 71459336 ~ 71466142 (-) |
| G1012224 | NA | non-coding | downstream | 4532 | 70458947 ~ 70459252 (-) |
| G1012162 | NA | non-coding | downstream | 45597 | 70417937 ~ 70418187 (-) |
| G1012140 | NA | non-coding | downstream | 57597 | 70405935 ~ 70406187 (-) |
| G1012107 | NA | non-coding | downstream | 83531 | 70379920 ~ 70380253 (-) |
| G1011959 | NA | non-coding | downstream | 190705 | 70272659 ~ 70273079 (-) |
| G1012523 | NA | non-coding | upstream | 88092 | 70552107 ~ 70552994 (-) |
| G1012524 | NA | non-coding | upstream | 89398 | 70553413 ~ 70556964 (-) |
| G1012615 | NA | non-coding | upstream | 249725 | 70713740 ~ 70714584 (-) |
| G1012692 | NA | non-coding | upstream | 356742 | 70820757 ~ 70821120 (-) |
| G1012708 | NA | non-coding | upstream | 369011 | 70833026 ~ 70833249 (-) |
| G1011014 | NA | other | downstream | 1157356 | 69305336 ~ 69306428 (-) |
| G1010922 | NA | other | downstream | 1344298 | 69116507 ~ 69119486 (-) |
| G1010443 | NA | other | downstream | 1775822 | 68687257 ~ 68687962 (-) |
| G1009720 | NA | other | downstream | 2492456 | 67971071 ~ 67971328 (-) |
| G1007506 | NA | other | downstream | 4090835 | 66372642 ~ 66372949 (-) |
| G1012814 | NA | other | upstream | 420461 | 70884476 ~ 70890991 (-) |
| G1013669 | NA | other | upstream | 1033293 | 71497308 ~ 71515434 (-) |
| G1013960 | NA | other | upstream | 1532066 | 71996081 ~ 71996688 (-) |
| G1014411 | NA | other | upstream | 1895270 | 72359285 ~ 72359505 (-) |
| G1014639 | NA | other | upstream | 1982639 | 72446654 ~ 72449340 (-) |
