Gene
RNA
| Item | Value |
|---|---|
| gene id | G1013892 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 71847453 ~ 71847833 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: trifunctional nucleotide phosphoesterase protein YfkN-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1153190 | True | 381 | lncRNA | 0.41 | 1 | 71847453 | 71847833 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536354 | LOC106585207 | coding | downstream | 760 | 71838302 ~ 71846693 (-) |
| LOC110536352 | LOC106580621 | coding | downstream | 214390 | 71628579 ~ 71633063 (-) |
| LOC110536351 | NA | coding | downstream | 219957 | 71620800 ~ 71627496 (-) |
| LOC100135988 | slr | coding | downstream | 248289 | 71524863 ~ 71599164 (-) |
| LOC110536349 | LOC106580618 | coding | downstream | 358561 | 71473159 ~ 71488892 (-) |
| LOC118937382 | NA | coding | upstream | 594136 | 72441969 ~ 72442889 (-) |
| LOC110536359 | LOC106580625 | coding | upstream | 605087 | 72452920 ~ 72584061 (-) |
| LOC110536361 | LOC106585212 | coding | upstream | 749954 | 72597787 ~ 72647320 (-) |
| LOC110536362 | LOC106580628 | coding | upstream | 802826 | 72650659 ~ 72704404 (-) |
| LOC110535109 | LOC106580631 | coding | upstream | 915167 | 72763000 ~ 72842417 (-) |
| G1013751 | LOC106580620 | non-coding | downstream | 162858 | 71648700 ~ 71684595 (-) |
| G1013745 | NA | non-coding | downstream | 210697 | 71636484 ~ 71636756 (-) |
| G1013741 | NA | non-coding | downstream | 228935 | 71618311 ~ 71618518 (-) |
| G1013740 | NA | non-coding | downstream | 229901 | 71617346 ~ 71617552 (-) |
| G1013729 | NA | non-coding | downstream | 235714 | 71611450 ~ 71611739 (-) |
| G1013893 | LOC106580708 | non-coding | upstream | 585 | 71848418 ~ 71849016 (-) |
| G1013894 | NA | non-coding | upstream | 1368 | 71849201 ~ 71849463 (-) |
| G1013895 | NA | non-coding | upstream | 2533 | 71850366 ~ 71850673 (-) |
| G1013901 | NA | non-coding | upstream | 11727 | 71859560 ~ 71859794 (-) |
| G1013913 | NA | non-coding | upstream | 19770 | 71867603 ~ 71867896 (-) |
| G1013669 | NA | other | downstream | 332019 | 71497308 ~ 71515434 (-) |
| G1012814 | NA | other | downstream | 956462 | 70884476 ~ 70890991 (-) |
| G1011014 | NA | other | downstream | 2541025 | 69305336 ~ 69306428 (-) |
| G1010922 | NA | other | downstream | 2727967 | 69116507 ~ 69119486 (-) |
| G1010443 | NA | other | downstream | 3159491 | 68687257 ~ 68687962 (-) |
| G1013960 | NA | other | upstream | 148248 | 71996081 ~ 71996688 (-) |
| G1014411 | NA | other | upstream | 511452 | 72359285 ~ 72359505 (-) |
| G1014639 | NA | other | upstream | 598821 | 72446654 ~ 72449340 (-) |
| rnft2 | rnft2 | other | upstream | 2455817 | 74303648 ~ 74312488 (-) |
| G1017417 | NA | other | upstream | 3042566 | 74890399 ~ 74891140 (-) |
