G1014509



Basic Information


Item Value
gene id G1014509
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 72440558 ~ 72441878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1153862
ACATAATCAaaattaactacacatggttgataatattactagtttaattatcttgtcctgcgttgcatataatcaaagtggtgcctgttaatttatcatcgaatcacagcctacttcgactTCGCCAAACGAGTGATGATTTGACAAAATGTCacagctttcttcctgggaaggagaggcggaccaaaacgcagtgtggttatagttcatggttctttaataagaaaacatgaacaaactacaaaacaataaacgtgaaaactgtaccagtcctaactggtgcataaaacgcaaagacaggaaacaatcacccacaaaatacccaaagaatttggctgcctaaatatggctcccaatcagagacaacgataaacacctgcctctgattgagaaccaatccaggcaaacatagacttacctagacacataaaagaacacaaccccataaatctacaaaaacgcctagacaagacaaaacacataaatcacccatttcacaccctggcctaaccaaaataataaaaaaaacaaagatggctcagaccagggcgtgacacaaaagcacatttgcgaaaaagcacaatcgttgcacaaatgtacctaaccataatcATAAATGCCTTCCTTAAAATCAACACacagaattatatatttttaaacctgcatatttagttaaaagaaacgcatgttagcaggcaatattaactagggaaactgTCACTTCTCTTGAGTTCAGTGCAagcggttctgtatttcactgaaagaataaacgttttggtttctaaatgatagtttccggatttgaccacgTTGATGACAAAAGGCTCGTATTTCGgtatgtttattataattaagtcaattgtttgatatttgatagagcagtctgactgagcggtggtaggcagcagcatgctcgtaagcattcattcaaacagcactttactgcatttgccagcagctcttagcaatgcttgaagcacggcgctgtttatgacttcaagcctatgaactcccgagattaggctggcaatactatagtgcctataaggacatccaatagtcaaaggtatatgaaatacaaatggtatagagagaaatagtcaacgcgtcataattcctataataactacaacctaaaacgtcttaactgggaatattgaagactcatgttaaaaggaatcaccagctttcatatgttctcatgttctgagcaaggaacttaaatgttagcttttttacatggcacatattgcactttcacttctccaacactttgtttttgcattatttaaaccaaattgaacatgtttcattatttatt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1153862 True 1321 lncRNA 0.37 1 72440558 72441878

Neighbor


gene id symbol gene type direction distance location
LOC110536354 LOC106585207 coding downstream 593865 71838302 ~ 71846693 (-)
LOC110536352 LOC106580621 coding downstream 807495 71628579 ~ 71633063 (-)
LOC110536351 NA coding downstream 813062 71620800 ~ 71627496 (-)
LOC100135988 slr coding downstream 841394 71524863 ~ 71599164 (-)
LOC110536349 LOC106580618 coding downstream 951666 71473159 ~ 71488892 (-)
LOC118937382 NA coding upstream 91 72441969 ~ 72442889 (-)
LOC110536359 LOC106580625 coding upstream 11042 72452920 ~ 72584061 (-)
LOC110536361 LOC106585212 coding upstream 155909 72597787 ~ 72647320 (-)
LOC110536362 LOC106580628 coding upstream 208781 72650659 ~ 72704404 (-)
LOC110535109 LOC106580631 coding upstream 321122 72763000 ~ 72842417 (-)
G1014500 NA non-coding downstream 2891 72437244 ~ 72437667 (-)
G1014488 NA non-coding downstream 13105 72425406 ~ 72427453 (-)
G1014435 NA non-coding downstream 60756 72379573 ~ 72379802 (-)
G1014432 NA non-coding downstream 63278 72376688 ~ 72377280 (-)
G1014431 NA non-coding downstream 64000 72376182 ~ 72376558 (-)
G1014510 NA non-coding upstream 3044 72444922 ~ 72445397 (-)
G1014674 NA non-coding upstream 103538 72545416 ~ 72546024 (-)
G1014681 NA non-coding upstream 113733 72555611 ~ 72556226 (-)
G1014684 NA non-coding upstream 116505 72558383 ~ 72559278 (-)
G1014685 NA non-coding upstream 118212 72560090 ~ 72562537 (-)
G1014411 NA other downstream 81053 72359285 ~ 72359505 (-)
G1013960 NA other downstream 443870 71996081 ~ 71996688 (-)
G1013669 NA other downstream 925124 71497308 ~ 71515434 (-)
G1012814 NA other downstream 1549567 70884476 ~ 70890991 (-)
G1011014 NA other downstream 3134130 69305336 ~ 69306428 (-)
G1014639 NA other upstream 4776 72446654 ~ 72449340 (-)
rnft2 rnft2 other upstream 1861772 74303648 ~ 74312488 (-)
G1017417 NA other upstream 2448521 74890399 ~ 74891140 (-)
G1018159 NA other upstream 2926570 75368448 ~ 75368826 (-)
ckap2l LOC106570813 other upstream 3801838 76202025 ~ 76246958 (-)

Expression



Co-expression Network