XLOC_028978 (si:ch211-209n20.59)


Basic Information

Item Value
gene id XLOC_028978
gene name si:ch211-209n20.59
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 38475577 ~ 38476901 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00056049
tctggatcatggaggacagacgaggattacagcaggaccacgcaaatatgtctgtttcctcactctggatccaaacacagcaaacactcaactcattctgtctgaggagaacagagaggtgaagtgtgtgagagagaatcagccgtatcctgatcatccacacagatttgatgGTTATGtttatcctcaggtgttgtgcagagagagtgtgtgtggacgctgttactgggagattgactggagtggagattatagtgtgtgtatatcagtgtcatataagagcatcaggaggaagggaagagGTGTTGAGTGTATGTTTGGaggtaatgctcagtcctggagtttgatctgTGATTCCTCCAGATTCATATTCAGGCACAATAACACagacactgatctcccagtgaagccactcagcaggagaataggagtgtttgtggatcacagtgcaggaactctgatcttctacaacatctatagagacacaatgagcctcatccactcagtccagaccacattcactgagccgctctgtgctgggttctGGCTTAAttatggatcatcagtgaaactgagctgaagactgacgagagatttacccagaatcctctggaggagcagtcagcagcagtgtgtgtgtgtgcgtataagagtctgtatgtgtgtgtgtgtgtgtgtgtataagagtctgtatgtgtgtgtgtgtgtgagtgtgtgtgtgcgtataagagtctgtatgtgtgtgtgtgtgtgtataagagtctgtgtgtgtgtgtgtgtgtgtataagagtctgtatgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagaaagtgcgcgtttgtgtctgtatgtgtgcatG

Function

symbol description
si:ch211-209n20.59 Predicted to be involved in intracellular signal transduction.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101977

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00056049 True 873 mRNA 0.46 2 38475577 38476901

Neighbor

gene id symbol gene type direction distance location
XLOC_028977 znf1092 coding downstream 54360 38410690 ~ 38421217 (-)
XLOC_028975 si:ch211-229l10.4 coding downstream 159682 38265870 ~ 38315895 (-)
XLOC_028974 znf1093 coding downstream 215579 38254699 ~ 38259998 (-)
XLOC_028973 CR381657.4 coding downstream 237873 38237604 ~ 38237704 (-)
XLOC_028972 CR381657.2 coding downstream 238387 38237117 ~ 38237190 (-)
XLOC_028979 BX324212.1 coding upstream 87663 38564564 ~ 38573606 (-)
XLOC_028980 BX324212.2 coding upstream 112652 38589553 ~ 38608436 (-)
XLOC_028981 si:dkey-59l11.10 coding upstream 341293 38818194 ~ 38829098 (-)
XLOC_028982 znf1127 coding upstream 399866 38876767 ~ 38877924 (-)
XLOC_028983 NA coding upstream 436632 38913533 ~ 38916444 (-)
XLOC_028971 CR381657.3 non-coding downstream 241311 38234160 ~ 38234266 (-)
XLOC_028970 CR381657.7 non-coding downstream 241838 38233633 ~ 38233739 (-)
XLOC_028969 CR381657.6 non-coding downstream 243425 38232079 ~ 38232152 (-)
XLOC_028987 NA non-coding upstream 832884 39309785 ~ 39310683 (-)
XLOC_028988 CR352303.1 non-coding upstream 880765 39357666 ~ 39357785 (-)
XLOC_028989 BX548067.3 non-coding upstream 887137 39364038 ~ 39364215 (-)

Expression


Co-expression Network