G1015082


Basic Information

Item Value
gene id G1015082
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 72822157 ~ 72833974 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1154555
agagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctctgacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtaatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttcaacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1154555 True 555 lncRNA 0.40 2 72822157 72833974

Neighbor

gene id symbol gene type direction distance location
LOC110536362 LOC106580628 coding downstream 117753 72650659 ~ 72704404 (-)
LOC110536361 LOC106585212 coding downstream 174837 72597787 ~ 72647320 (-)
LOC110536359 LOC106580625 coding downstream 238096 72452920 ~ 72584061 (-)
LOC118937382 NA coding downstream 379268 72441969 ~ 72442889 (-)
LOC110536354 LOC106585207 coding downstream 975464 71838302 ~ 71846693 (-)
LOC110536649 LOC106580712 coding upstream 15716 72849690 ~ 72859975 (-)
LOC110536363 LOC106579794 coding upstream 40502 72823917 ~ 72883883 (-)
LOC110536366 LOC106585221 coding upstream 94202 72928176 ~ 73062269 (-)
LOC110536368 LOC106579816 coding upstream 235358 73069332 ~ 73094829 (-)
ppil3 ppil3 coding upstream 423064 73257038 ~ 73260745 (-)
LOC110535109 LOC106580631 non-coding downstream 20789 72763000 ~ 72842417 (-)
G1015071 NA non-coding downstream 60481 72761170 ~ 72761676 (-)
G1015072 NA non-coding downstream 61436 72760284 ~ 72760721 (-)
G1015070 NA non-coding downstream 64897 72756514 ~ 72757260 (-)
G1015069 NA non-coding downstream 65988 72755865 ~ 72756169 (-)
G1015154 NA non-coding upstream 72812 72906786 ~ 72908763 (-)
G1015279 NA non-coding upstream 313504 73147478 ~ 73147750 (-)
G1015371 NA non-coding upstream 321430 73155404 ~ 73155865 (-)
G1015378 NA non-coding upstream 330113 73164087 ~ 73164363 (-)
G1015387 NA non-coding upstream 345478 73179452 ~ 73179677 (-)
G1014639 NA other downstream 372817 72446654 ~ 72449340 (-)
G1014411 NA other downstream 462652 72359285 ~ 72359505 (-)
G1013960 NA other downstream 825469 71996081 ~ 71996688 (-)
G1013669 NA other downstream 1306723 71497308 ~ 71515434 (-)
G1012814 NA other downstream 1931166 70884476 ~ 70890991 (-)
rnft2 rnft2 other upstream 1469676 74303648 ~ 74312488 (-)
G1017417 NA other upstream 2056425 74890399 ~ 74891140 (-)
G1018159 NA other upstream 2534474 75368448 ~ 75368826 (-)
ckap2l LOC106570813 other upstream 3409742 76202025 ~ 76246958 (-)
G1019056 NA other upstream 3711134 76545108 ~ 76545741 (-)

Expression


Co-expression Network