XLOC_028992 (BX548067.1)


Basic Information

Item Value
gene id XLOC_028992
gene name BX548067.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 39451635 ~ 39469709 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00056071
AGTAAAGCAACTACGAAAGAGAACTATTTGTGCATCTTAAAGCATCGATGCTTCACAAAAGGATGGATAACTGGTATGCCGTAATGATGGTCACAGAAATCCTAAATGAAGGCAGTAGTTCTGTTTCTGTTTACTACAAGGGATATCTTTCCAAATGAGGAAACTACCCACAACTATGGTGATTCTTCTTGGCCATGGCATTCAAGGGAATTGCATGAAGCATCATTGGTGACTGAGATTGAATGCAGTGTGAAAACTTCCATGTCAGGGAAAGAGAAACAATTATGTGAAGAGTCATCAATGGCAATGATTGAATGTGGTTCGAAAAATGTCTACATCAGGGAAGGTGTAAGAATTGCATGAAGAGTCATTGGTGACTGGGATCAAATGCTGTTCGAAAACTTCTAAATCAGGGAAAGAGACAGAGTTGAATGAAGAGTCATTGGTGACTGGGATCAAATGCAGAGCGAAAACTTCCAAGTCAGGGAAAGAGACAGAATTATGTGAAGAGTCATCAATGGCGAGGATCAAATGCAGTGCAGAAACTTCCACATCAGGGAAAGAGACATGTCGCCATGAAGTACACAGTGCTGTTATTTCCAGTTTGGTTTCTAGCGATGATTGTAGTGGTCCTATGTCAAGTAGAACATGAAAACTTCAACTTGCAAATACACCAAATCAAGGAAAGTTATGATAAAATTATGGAGCACACTAAAGTGGATGCAGTCATGGAACATTTTAAAGGGACACCTCACTACAAAAGCAGAGCGTGATCAATGCAAGATAGCAGAAGACCAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103045

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00056071 True 798 processed_transcript 0.40 9 39451635 39469709

Neighbor

gene id symbol gene type direction distance location
XLOC_028991 si:dkey-261o4.9 coding downstream 2806 39428602 ~ 39448829 (-)
XLOC_028989 BX548067.3 coding downstream 87420 39364038 ~ 39364215 (-)
XLOC_028988 CR352303.1 coding downstream 93850 39357666 ~ 39357785 (-)
XLOC_028987 NA coding downstream 140952 39309785 ~ 39310683 (-)
XLOC_028986 si:ch73-236c18.2 coding downstream 183584 39244401 ~ 39268051 (-)
XLOC_028993 NA coding upstream 173915 39643624 ~ 39702186 (-)
XLOC_028994 NA coding upstream 243069 39712778 ~ 39713950 (-)
XLOC_028995 CR749167.1 coding upstream 359466 39829175 ~ 39829819 (-)
XLOC_028996 znf979 coding upstream 449507 39919216 ~ 39942347 (-)
XLOC_028997 si:ch211-215p11.1 coding upstream 522544 39992253 ~ 40008875 (-)
XLOC_028983 NA non-coding downstream 535191 38913533 ~ 38916444 (-)
XLOC_028979 BX324212.1 non-coding downstream 878029 38564564 ~ 38573606 (-)
XLOC_028998 NA non-coding upstream 549264 40018973 ~ 40019703 (-)
XLOC_029001 NA non-coding upstream 1018855 40488564 ~ 40497140 (-)

Expression


Co-expression Network