XLOC_028998



Basic Information


Item Value
gene id XLOC_028998
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 40018973 ~ 40019703 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00058275
CAGTGCTGAAATAGAAAAGCAGGTGATCAAAACGACTTTGTATATTAAAGATAAGTCATATCCACAGTGTATATTTACTTTCTGGGAATGCTGATATAAAAGTATACCTTTGGTAGTACTCTCCAGAGCTCTCGTCGGATAAGGACTCATTTGGAGGCTCCAATGGACTTTCTGCACCTTCTCCAGAGCTTTGAGGCACAGAAGATGTTGTCGACCGAGCTGGTTCCGGGAGGACTGAAGGTAAGTTATTAATCACCAACCCCTTTGACTGCATCTCCGCAATCATCCTAAAACAAGGAACATAAAATAAGGTCAAATAAACaataccaaaaatgtatatttatcatTATATGCAGATGTTAGATTTGAAGTCCGATACATCAAATAAGATAACACAACTGAATACAAACCTGGCAAGAGGATTAGTAGAGTCCAATATGTCACAAATTTTTCCAAACTCCCAGAAACGTCCTTTGTGACAGAATTCAGACAACTCCTTCTTGGCCTCTTTGACGACAGCCTGGATCTCTGCTTCTGTGCTGTTCCTCATACACACCTTCCTGAGATGCCCAGGAAGAGAGTGAGGAGCCTTTTTGCACACAGGGCAGAGGAAAAACATCCTGCTGTGGAAGGATCTGTGTggataataaaatcaaaatgttataaaatgaaGAGACCAAGAGCAGCTTTGGTAAGGTTTGGGGTCCACCACACCCCACCCCCAACTCCAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00058275 True 731 lncRNA 0.42 1 40018973 40019703

Neighbor


gene id symbol gene type direction distance location
XLOC_028997 si:ch211-215p11.1 coding downstream 10098 39992253 ~ 40008875 (-)
XLOC_028996 znf979 coding downstream 76626 39919216 ~ 39942347 (-)
XLOC_028995 CR749167.1 coding downstream 189154 39829175 ~ 39829819 (-)
XLOC_028994 NA coding downstream 305023 39712778 ~ 39713950 (-)
XLOC_028993 NA coding downstream 316787 39643624 ~ 39702186 (-)
XLOC_028999 si:dkey-22h13.2 coding upstream 337810 40357513 ~ 40364889 (-)
XLOC_029000 si:dkey-22h13.3 coding upstream 382314 40402017 ~ 40407853 (-)
XLOC_029001 NA coding upstream 468861 40488564 ~ 40497140 (-)
XLOC_029002 NA coding upstream 478114 40497817 ~ 40503730 (-)
XLOC_029003 si:dkey-57c22.1 coding upstream 505372 40525075 ~ 40536509 (-)
XLOC_028992 BX548067.1 non-coding downstream 549264 39451635 ~ 39469709 (-)
XLOC_028989 BX548067.3 non-coding downstream 654758 39364038 ~ 39364215 (-)
XLOC_029004 NA non-coding upstream 532456 40552159 ~ 40598742 (-)
XLOC_029006 NA non-coding upstream 692159 40711862 ~ 40937754 (-)
XLOC_029007 NA non-coding upstream 737140 40756843 ~ 40757716 (-)

Expression



Co-expression Network