XLOC_002901 (pimr167)


Basic Information

Item Value
gene id XLOC_002901
gene name pimr167
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 34220492 ~ 34243269 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005356
AGTATAAAGCTTTTTGACGTAGCAGAAACTCTCATTAGCTTCTTTGGATGtctagtagttcagtactttctgcgATTCAACAGTACAGTGATACAATGGCATTTTCAAAACTGATTAACCGTCTGAAGAAAGCGTTTGGTGTTAAGTGTGCGAACGAACAACCGTGTGAGCCACTCGAACCCACCGGCAGCACGACAGAGAATCACCGTCATCTGATGACCGATGACCCGGCCGTCGCTGCAGGAAAACAGGCAGGGagacagaaaaagaggaaaaTCAAATTGTCTCCCATCTTCTTCGCCTGTTTTTCCAGAAGAAGAGCTACTGTTGTTGATCAGCTATGTGTGCAGGAGATCCATGAACTTCACGCAGAGCCCATCAGTAGCTCTAAATTCTTCTGCACTGCTGTGAGCAACCTGGAGCTGGAAGTTCTCCAACCTCCAGCTCTTGATGCTCCAGCAGACGAAGATTTGGACTTTAAGCCGGAAATGAACAGCTTTGACTCTGCAGTGGTCATTGAGAACGACTCTGCAGAGCTTCACTTCCCAGAAGACATTGAATCCTCCCTCAGTGAGGACAGCCTGGAGCAAGAGCTTGATAGTCCTCCAAGTTCACCATCCGATGAGGACAATGAACTTCCAGTGAGCCAGCAGCTCATAACAGATGACATCTGTGACTCTGCCCTGGATGAAAACTCAAACCCTTTACCGGATCAGGTCTCACAAGAGGACTCTGCTGTGAAGTCTACAGCAGATGatgggacctgcttggacaataATGACATCAGCTGCCGCTACAAACTCGGAAAGCAGCTTGGTGAAGGAGGTTTCGGCTCCGTGTATGAGGGGATTCGCATACAGGATGGTCTGCAGGTGGCAGTTAAATTTGTCCAGAAGACCCCAAATATGCAAGATGTCAGCTCTtcatgtgaccaGCCACTTCCTCTAGAGATCACCTTGGCAAACATGGCCAGCGGTGGCTCCAGGTGTTCGAACATTATTCAGCTTCTGGACTGGCAGGTCTTTGAAAACCATTACGTCATGGTGATGGAGCGGCCTAGTCCAAGCATGGACCTGGAGGCATTCCTTGAAGTCAGCGGAGGAGTCCTCAGTGAGAAAACAGCACATACCATCATGAGGCAAGCTGTTTATGCGGCCAACGTGTGCTGTTACCGCGGGGTGTTCCACCGGGACATTAAGCTTCAAAACCTGCTGGTGAACCCCGACACACTGGAAGTCAAGCTGATCGACTTCGGGTGTGGAGACTTCATGATGGAATCAGCCTACAGTATCTTCTCTGGCACAGAAGCGTACATCCCGCCAGAGTTTTATGAAAAAGGATGCTACCGGGCCAAACCAGCGACGGTCTATTCTCTTGGGGTTCTTCTGTTCACAATGCTCCATGGAGAATTCCCATCAGCGTATGACCTGTACTACCTCCAACATGACTGgtccaaatttaccctctctcaagAATGCTGTGATATGATGAGGGCTTGTCTGCATGAGAATCCAGAGTGCAGAATTCCTCTAGAAGAGATGCCTTACCACGACTGGTCCATGCTGGAGTTCTGAGTCACATTAGCagaatgttttgtatatttgatttttgtacatgtctgtaataaagatatattttattg
>TCONS_00005357
AGTATAAAGCTTTTTGACGTAGCAGAAACTCTCATTAGCTTCTTTGGATGtctagtagttcagtactttctgcgATTCAACAGTACAGTGATACAATGGCATTTTCAAAACTGATTAACCGTCTGAAGAAAGCGTTTGGTGTTAAGTGTGCGAACGAACAACCGTGTGAGCCACTCGAACCCACCGGCAGCACGACAGAGAATCACCGTCATCTGATGACCGATGACCCGGCCGTCGCTGCAGGAAAACAGGCAGGGagacagaaaaagaggaaaaTCAAATTGTCTCCCATCTTCTTCGCCTGTTTTTCCAGAAGAAGAGCTACTGTTGTTGATCAGCTATGTGTGCAGGAGATCCATGAACTTCACGCAGAGCCCATCAGTAGCTCTAAATTCTTCTGCACTGCTGTGAGCAACCTGGAGCTGGAAGTTCTCCAACCTCCAGCTCTTGATGCTCCAGCAGACGAAGATTTGGACTTTAAGCCGGAAATGAACAGCTTTGACTCTGCAGTGGTCATTGAGAACGACTCTGCAGAGCTTCACTTCCCAGAAGACATTGAATCCTCCCTCAGTGAGGACAGCCTGGAGCAAGAGCTTGATAGTCCTCCAAGTTCACCATCCGATGAGGACAATGAACTTCCAGTGAGCCAGCAGCTCATAACAGATGACATCTGTGACTCTGCCCTGGATGAAAACTCAAACCCTTTACCGGATCAGGTCTCACAAGAGGACTCTGCTGTGAAGTCTACAGCAGATGatgggacctgcttggacaataATGACATCAGCTGCCGCTACAAACTCGGAAAGCAGCTTGGTGAAGGAGGTTTCGGCTCCGTGTATGAGGGGATTCGCATACAGGATGGTCTGCAGGTGGCAGTTAAATTTGTCCAGAAGACCCCAAATATGCAAGATGTCAGCTCTtcatgtgaccaGCCACTTCCTCTAGAGATCACCTTGGCAAACATGGCCAGCGATGGCTCCAGGTGTTCGAACATTATTCAGCTTCTGGACTGGCAGGTCTTTAAAAACCATTACGTCATGGTGATGGAGCGGCCTAGTCCAAGCATGGACCTGGAGGCATTCCTTGAAGTCAGCGGAGGAGTCCTCAGTGAGAAAACAGCACATACCATCATGAGGCAAGCTGTTTATGCGGCCAACGTGTGCTGTTACCGCGGGGTGTTCCACCGGGACATTAAGCTTCAAAACCTGCTGGTGAACCCCGACACACTGGAAGTCAAGCTGATCGACTTCGGGTGTGGAGACTTCATGATGGAATCAGCCTACAGTATCTTCTCTGGCACAGAAGCGTACATCCCGCCAGAGTTTTATGAAAAAGGATGCTACCGGGCCAAACCAGCGACGGTCTATTCTCTTGGGGTTCTTCTGTTCACAATGCTCCATGGAGAATTCCCATCAGCGTATGACCTGTACTACCTCCAACATGACTGgtccaaatttaccctctctcaagAATGCTGTGATATGATGAGGGCTTGTCTGCATGAGAATCCAGAGTGCAGAATTCCTCTAGAAGAGATGCCTTACCACGACTGGTCCATGCTGGAGTTCTGAGTCACATTAGCagaatgttttgtatatttgatttttgtacatgtctgtaataaagatatattttattgAA

Function

symbol description
pimr167 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109962

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005356 False 1642 mRNA 0.48 7 34220492 34243269
TCONS_00005357 True 1644 mRNA 0.48 7 34240084 34243269

Neighbor

gene id symbol gene type direction distance location
XLOC_002899 pimr148 coding downstream 19742 34187231 ~ 34200750 (-)
XLOC_002900 NA coding downstream 21926 34196782 ~ 34198566 (-)
XLOC_002897 pimr150 coding downstream 69820 34120543 ~ 34150672 (-)
XLOC_002896 pimr144 coding downstream 112573 34086591 ~ 34107919 (-)
XLOC_002895 BX548044.8 coding downstream 153206 34059007 ~ 34067286 (-)
XLOC_002902 BX510654.1 coding upstream 83993 34327262 ~ 34327394 (-)
XLOC_002903 dclk1a coding upstream 494053 34737322 ~ 34871737 (-)
XLOC_002904 ccdc169 coding upstream 628926 34872195 ~ 34889053 (-)
XLOC_002905 sparta coding upstream 646059 34889328 ~ 34916208 (-)
XLOC_002906 CT573139.2 coding upstream 707791 34951060 ~ 34959178 (-)
XLOC_002891 BX569785.1 non-coding downstream 340128 33876131 ~ 33880364 (-)
XLOC_002890 NA non-coding downstream 555703 33663165 ~ 33664789 (-)
XLOC_002885 dre-mir-130a non-coding downstream 843278 33377130 ~ 33377214 (-)
XLOC_002884 dre-mir-301a non-coding downstream 843406 33377001 ~ 33377086 (-)
XLOC_002909 NA non-coding upstream 811012 35054281 ~ 35058444 (-)
XLOC_002912 BX465844.1 non-coding upstream 916741 35160010 ~ 35164291 (-)
XLOC_002917 NA non-coding upstream 1069623 35312892 ~ 35321637 (-)

Expression


Co-expression Network