Gene
RNA
| Item | Value |
|---|---|
| gene id | G1019165 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 76788514 ~ 76788726 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1159210 | True | 213 | lncRNA | 0.47 | 1 | 76788514 | 76788726 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536403 | LOC106570814 | coding | downstream | 449665 | 76267566 ~ 76338849 (-) |
| LOC110536401 | LOC106570815 | coding | downstream | 535029 | 76250424 ~ 76253485 (-) |
| ckap2l | LOC106570813 | coding | downstream | 541556 | 76202025 ~ 76246958 (-) |
| LOC110536399 | NA | coding | downstream | 589601 | 76185050 ~ 76198913 (-) |
| LOC110536398 | LOC107386217 | coding | downstream | 638721 | 76142406 ~ 76149793 (-) |
| LOC110536408 | ptar1 | coding | upstream | 29724 | 76818450 ~ 76848904 (-) |
| LOC118937405 | slc39a14 | coding | upstream | 153654 | 76942380 ~ 76965599 (-) |
| hmgcra | hmgcr | coding | upstream | 272117 | 77060843 ~ 77081765 (-) |
| LOC110536419 | NA | coding | upstream | 574197 | 77362923 ~ 77365681 (-) |
| LOC110536421 | LOC106570882 | coding | upstream | 601054 | 77389780 ~ 77393129 (-) |
| G1019164 | NA | non-coding | downstream | 630 | 76787507 ~ 76787884 (-) |
| G1019161 | NA | non-coding | downstream | 8856 | 76779422 ~ 76779658 (-) |
| G1019160 | NA | non-coding | downstream | 9248 | 76779059 ~ 76779266 (-) |
| G1019150 | NA | non-coding | downstream | 30724 | 76757467 ~ 76757790 (-) |
| G1019149 | NA | non-coding | downstream | 32538 | 76755757 ~ 76755976 (-) |
| G1019171 | NA | non-coding | upstream | 16297 | 76805023 ~ 76805244 (-) |
| G1019172 | NA | non-coding | upstream | 16727 | 76805453 ~ 76805678 (-) |
| G1019176 | NA | non-coding | upstream | 18541 | 76807267 ~ 76807525 (-) |
| G1019188 | NA | non-coding | upstream | 29035 | 76817761 ~ 76818050 (-) |
| G1019056 | NA | other | downstream | 242773 | 76545108 ~ 76545741 (-) |
| G1018159 | NA | other | downstream | 1419688 | 75368448 ~ 75368826 (-) |
| G1017417 | NA | other | downstream | 1897374 | 74890399 ~ 74891140 (-) |
| rnft2 | rnft2 | other | downstream | 2481705 | 74303648 ~ 74312488 (-) |
| G1019413 | NA | other | upstream | 166640 | 76955366 ~ 76956817 (-) |
| G1019926 | NA | other | upstream | 787145 | 77575871 ~ 77576664 (-) |
| ccdc125 | ccdc125 | other | upstream | 831357 | 77619098 ~ 77644804 (-) |
| LOC110536450 | LOC106570886 | other | upstream | 1696435 | 78485116 ~ 78487202 (-) |
| G1021084 | NA | other | upstream | 1764902 | 78553628 ~ 78566847 (-) |
