Gene
RNA
| Item | Value |
|---|---|
| gene id | G1019176 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 76807267 ~ 76807525 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1159223 | True | 259 | lncRNA | 0.38 | 1 | 76807267 | 76807525 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535119 | apba1 | coding | downstream | 4342 | 76670921 ~ 76802925 (-) |
| LOC110536403 | LOC106570814 | coding | downstream | 468418 | 76267566 ~ 76338849 (-) |
| LOC110536401 | LOC106570815 | coding | downstream | 553782 | 76250424 ~ 76253485 (-) |
| ckap2l | LOC106570813 | coding | downstream | 560309 | 76202025 ~ 76246958 (-) |
| LOC110536399 | NA | coding | downstream | 608354 | 76185050 ~ 76198913 (-) |
| LOC110536408 | ptar1 | coding | upstream | 10925 | 76818450 ~ 76848904 (-) |
| LOC118937405 | slc39a14 | coding | upstream | 134855 | 76942380 ~ 76965599 (-) |
| hmgcra | hmgcr | coding | upstream | 253318 | 77060843 ~ 77081765 (-) |
| LOC110536419 | NA | coding | upstream | 555398 | 77362923 ~ 77365681 (-) |
| LOC110536421 | LOC106570882 | coding | upstream | 582255 | 77389780 ~ 77393129 (-) |
| G1019172 | NA | non-coding | downstream | 1589 | 76805453 ~ 76805678 (-) |
| G1019171 | NA | non-coding | downstream | 2023 | 76805023 ~ 76805244 (-) |
| G1019165 | NA | non-coding | downstream | 18541 | 76788514 ~ 76788726 (-) |
| G1019164 | NA | non-coding | downstream | 19383 | 76787507 ~ 76787884 (-) |
| G1019161 | NA | non-coding | downstream | 27609 | 76779422 ~ 76779658 (-) |
| G1019188 | NA | non-coding | upstream | 10236 | 76817761 ~ 76818050 (-) |
| G1019408 | NA | non-coding | upstream | 141507 | 76949032 ~ 76950167 (-) |
| G1019418 | NA | non-coding | upstream | 159511 | 76967036 ~ 76970016 (-) |
| G1019420 | NA | non-coding | upstream | 164255 | 76971780 ~ 76972507 (-) |
| G1019056 | NA | other | downstream | 261526 | 76545108 ~ 76545741 (-) |
| G1018159 | NA | other | downstream | 1438441 | 75368448 ~ 75368826 (-) |
| G1017417 | NA | other | downstream | 1916127 | 74890399 ~ 74891140 (-) |
| rnft2 | rnft2 | other | downstream | 2500458 | 74303648 ~ 74312488 (-) |
| G1019413 | NA | other | upstream | 147841 | 76955366 ~ 76956817 (-) |
| G1019926 | NA | other | upstream | 768346 | 77575871 ~ 77576664 (-) |
| ccdc125 | ccdc125 | other | upstream | 812558 | 77619098 ~ 77644804 (-) |
| LOC110536450 | LOC106570886 | other | upstream | 1677636 | 78485116 ~ 78487202 (-) |
| G1021084 | NA | other | upstream | 1746103 | 78553628 ~ 78566847 (-) |
