G1019858


Basic Information

Item Value
gene id G1019858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 77420692 ~ 77428825 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1160134
CCAAAAGGGCCACGTCGTTACACTGTAAAAGGTAAATATCGAATGGTTTCAAATCTAGTAGAAATATCGATGTATCTATTTTAATGTGATATGGACCATCTTCTAATGCATCTTCTGAGAAATCATAAAACAATTCAAAAACATGATAAAGCCAGACTGAGACCATCTTGCCGTAAAGCACGTTGTTTTAATTGATGCTCTAAGGAAGTGAATACATGAGTGACAGGGTGAGATAACCAATCAGACACAAGGTCACAAAGGTCATAGGTTACAATCTAATCATCATTCTGTTCCATCTAGTGACTGTAGTCGTAGCTGTAGGTGTAGTAGACGGTGCCTTTCTTCAGGTGGCAGGTCTCAGTGTGTCTTCCTGGGCGGATGGTGGTGGTGCAGGTTCCCAGGCGGTGATCTGGTCCGACGTTATTATCCCAcacctaataataa
>TU1160135
CCAAAAGGGCCACGTCGTTACACTGTAAAAGGTAAATATCGAATGGTTTCAAATCTAGTAGAAATATCGATGTATCTATTTTAATGTGATATGGACCATCTTCTAATGCATCTTCTGAGAAATCATAAAACAATTCAAAAACATGATAAAGCCAGACTGAGACCATCTTGCCGTAAAGCACGTTGTTTTAATTGATGCTCTAAGGAAGTGAATACATGAGTGACAGGGTGAGATAACCAATCAGACACAAGGTCACAAAGGTCATAGGTTACAATCTAATCATCATTCTGTTCCATCTAGTGACTGTAGTCGTAGCTGTAGGTGTAGTAGACGGTGCCTTTCTTCAGGTGGCAGGTCTCAGTGTGTCTTCCTGGGCGGATGGTGGTGTAGTAGACGGTGCCTTTCTTCAGGTGGCAGGTCTCAGTGTGTCTTCCTGGGCGGATGGTGGTGGTGCAGGTTCCCAGGCGGTGATCTGGTCCGACGTTATTATCCCAcacctaataataa

Function

NR:

description
cytosolic phospholipase A2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1160134 False 444 lncRNA 0.42 2 77420692 77428825
TU1160135 True 507 lncRNA 0.44 2 77420692 77428825

Neighbor

gene id symbol gene type direction distance location
LOC110536421 LOC106570882 coding downstream 27563 77389780 ~ 77393129 (-)
LOC110536419 NA coding downstream 55011 77362923 ~ 77365681 (-)
hmgcra hmgcr coding downstream 338927 77060843 ~ 77081765 (-)
LOC118937405 slc39a14 coding downstream 455093 76942380 ~ 76965599 (-)
LOC110536408 ptar1 coding downstream 571788 76818450 ~ 76848904 (-)
LOC110536422 LOC106570884 coding upstream 33504 77462329 ~ 77463777 (-)
LOC118937408 LOC106570885 coding upstream 39471 77468296 ~ 77475022 (-)
LOC110536424 LOC106570873 coding upstream 53047 77481872 ~ 77515930 (-)
LOC118937407 LOC106570835 coding upstream 100855 77529680 ~ 77531884 (-)
fam151b fam151b coding upstream 176343 77605168 ~ 77618259 (-)
G1019859 NA non-coding downstream 10195 77409968 ~ 77410497 (-)
G1019679 NA non-coding downstream 88905 77331517 ~ 77331787 (-)
G1019664 NA non-coding downstream 117739 77302536 ~ 77302953 (-)
G1019657 NA non-coding downstream 133072 77287376 ~ 77287620 (-)
G1019544 NA non-coding downstream 245181 77175187 ~ 77175511 (-)
G1019894 NA non-coding upstream 49270 77478095 ~ 77478621 (-)
G1019898 NA non-coding upstream 71828 77500653 ~ 77501105 (-)
G1019904 NA non-coding upstream 93859 77522684 ~ 77522927 (-)
G1019907 NA non-coding upstream 106455 77535280 ~ 77535556 (-)
G1019913 NA non-coding upstream 113519 77542344 ~ 77552131 (-)
G1019413 NA other downstream 463875 76955366 ~ 76956817 (-)
G1019056 NA other downstream 874951 76545108 ~ 76545741 (-)
ckap2l LOC106570813 other downstream 1173805 76202025 ~ 76246958 (-)
G1018159 NA other downstream 2051866 75368448 ~ 75368826 (-)
G1017417 NA other downstream 2529552 74890399 ~ 74891140 (-)
G1019926 NA other upstream 147046 77575871 ~ 77576664 (-)
ccdc125 ccdc125 other upstream 191258 77619098 ~ 77644804 (-)
LOC110536450 LOC106570886 other upstream 1056336 78485116 ~ 78487202 (-)
G1021084 NA other upstream 1124803 78553628 ~ 78566847 (-)
G1021129 NA other upstream 1204796 78633621 ~ 78634401 (-)

Expression


Co-expression Network