Gene
RNA
| Item | Value |
|---|---|
| gene id | G1020727 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 78328393 ~ 78336821 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| GAS2-like protein 3 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1161150 | True | 231 | lncRNA | 0.50 | 2 | 78328393 | 78336821 |
78,324,000
78,326,000
78,328,000
78,330,000
78,332,000
78,334,000
78,334,000
78,336,000
78,338,000
78,340,000
78,342,000
78,344,000
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936501 | LOC106570849 | coding | downstream | 506839 | 77778061 ~ 77821554 (-) |
| LOC110535124 | LOC106570849 | coding | downstream | 550371 | 77759929 ~ 77778022 (-) |
| erap1b | LOC106570844 | coding | downstream | 602472 | 77700933 ~ 77725921 (-) |
| rad17 | rad17 | coding | downstream | 668530 | 77645962 ~ 77659863 (-) |
| ccdc125 | ccdc125 | coding | downstream | 683589 | 77619098 ~ 77644804 (-) |
| LOC110536447 | LOC106570860 | coding | upstream | 77972 | 78414793 ~ 78433486 (-) |
| LOC110536449 | LOC106570861 | coding | upstream | 131712 | 78468533 ~ 78476320 (-) |
| LOC110536450 | LOC106570886 | coding | upstream | 148295 | 78485116 ~ 78487202 (-) |
| cnot6l | cnot6l | coding | upstream | 437744 | 78774565 ~ 78797212 (-) |
| LOC110536655 | LOC106570895 | coding | upstream | 858052 | 79194873 ~ 79224499 (-) |
| G1020722 | NA | non-coding | downstream | 1079 | 78321313 ~ 78327314 (-) |
| G1020592 | NA | non-coding | downstream | 22711 | 78305449 ~ 78305682 (-) |
| G1020582 | NA | non-coding | downstream | 36377 | 78291776 ~ 78292016 (-) |
| G1020577 | NA | non-coding | downstream | 42382 | 78285420 ~ 78286011 (-) |
| G1020575 | NA | non-coding | downstream | 45406 | 78282785 ~ 78282987 (-) |
| G1020763 | NA | non-coding | upstream | 52419 | 78389240 ~ 78391349 (-) |
| G1020767 | NA | non-coding | upstream | 66464 | 78403285 ~ 78404053 (-) |
| G1020789 | NA | non-coding | upstream | 116767 | 78453588 ~ 78455868 (-) |
| G1020790 | NA | non-coding | upstream | 120322 | 78457143 ~ 78458484 (-) |
| G1020796 | NA | non-coding | upstream | 143284 | 78480105 ~ 78480631 (-) |
| G1019926 | NA | other | downstream | 751729 | 77575871 ~ 77576664 (-) |
| G1019413 | NA | other | downstream | 1371576 | 76955366 ~ 76956817 (-) |
| G1019056 | NA | other | downstream | 1782652 | 76545108 ~ 76545741 (-) |
| ckap2l | LOC106570813 | other | downstream | 2081506 | 76202025 ~ 76246958 (-) |
| G1021084 | NA | other | upstream | 216807 | 78553628 ~ 78566847 (-) |
| G1021129 | NA | other | upstream | 296800 | 78633621 ~ 78634401 (-) |
| G1021664 | NA | other | upstream | 1085689 | 79422510 ~ 79423479 (-) |
| G1021853 | NA | other | upstream | 1368398 | 79705219 ~ 79705722 (-) |
