Gene
RNA
| Item | Value |
|---|---|
| gene id | G1020789 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 78453588 ~ 78455868 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1161227 | True | 335 | lncRNA | 0.42 | 2 | 78453588 | 78455868 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536447 | LOC106570860 | coding | downstream | 20102 | 78414793 ~ 78433486 (-) |
| LOC118936501 | LOC106570849 | coding | downstream | 632034 | 77778061 ~ 77821554 (-) |
| LOC110535124 | LOC106570849 | coding | downstream | 675566 | 77759929 ~ 77778022 (-) |
| erap1b | LOC106570844 | coding | downstream | 727667 | 77700933 ~ 77725921 (-) |
| rad17 | rad17 | coding | downstream | 793725 | 77645962 ~ 77659863 (-) |
| LOC110536449 | LOC106570861 | coding | upstream | 12665 | 78468533 ~ 78476320 (-) |
| LOC110536450 | LOC106570886 | coding | upstream | 29248 | 78485116 ~ 78487202 (-) |
| cnot6l | cnot6l | coding | upstream | 318697 | 78774565 ~ 78797212 (-) |
| LOC110536655 | LOC106570895 | coding | upstream | 739005 | 79194873 ~ 79224499 (-) |
| LOC110535130 | LOC106570891 | coding | upstream | 803443 | 79259311 ~ 79265496 (-) |
| G1020767 | NA | non-coding | downstream | 49535 | 78403285 ~ 78404053 (-) |
| G1020763 | NA | non-coding | downstream | 62239 | 78389240 ~ 78391349 (-) |
| G1020719 | NA | non-coding | downstream | 114578 | 78322958 ~ 78339010 (-) |
| G1020720 | NA | non-coding | downstream | 115235 | 78327368 ~ 78338353 (-) |
| G1020727 | NA | non-coding | downstream | 116767 | 78328393 ~ 78336821 (-) |
| G1020790 | NA | non-coding | upstream | 1275 | 78457143 ~ 78458484 (-) |
| G1020796 | NA | non-coding | upstream | 24237 | 78480105 ~ 78480631 (-) |
| G1020813 | NA | non-coding | upstream | 54282 | 78510150 ~ 78510530 (-) |
| G1021075 | NA | non-coding | upstream | 62172 | 78518040 ~ 78518259 (-) |
| G1021095 | NA | non-coding | upstream | 91731 | 78547599 ~ 78552566 (-) |
| ccdc125 | ccdc125 | other | downstream | 826022 | 77619098 ~ 77644804 (-) |
| G1019926 | NA | other | downstream | 876924 | 77575871 ~ 77576664 (-) |
| G1019413 | NA | other | downstream | 1496771 | 76955366 ~ 76956817 (-) |
| G1019056 | NA | other | downstream | 1907847 | 76545108 ~ 76545741 (-) |
| ckap2l | LOC106570813 | other | downstream | 2206701 | 76202025 ~ 76246958 (-) |
| G1021084 | NA | other | upstream | 97760 | 78553628 ~ 78566847 (-) |
| G1021129 | NA | other | upstream | 177753 | 78633621 ~ 78634401 (-) |
| G1021664 | NA | other | upstream | 966642 | 79422510 ~ 79423479 (-) |
| G1021853 | NA | other | upstream | 1249351 | 79705219 ~ 79705722 (-) |
