Gene
RNA
| Item | Value |
|---|---|
| gene id | G1020790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 78457143 ~ 78458484 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1161228 | False | 239 | lncRNA | 0.33 | 3 | 78457143 | 78458484 |
| TU1161229 | True | 239 | lncRNA | 0.33 | 3 | 78457233 | 78458484 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536447 | LOC106570860 | coding | downstream | 23657 | 78414793 ~ 78433486 (-) |
| LOC118936501 | LOC106570849 | coding | downstream | 635589 | 77778061 ~ 77821554 (-) |
| LOC110535124 | LOC106570849 | coding | downstream | 679121 | 77759929 ~ 77778022 (-) |
| erap1b | LOC106570844 | coding | downstream | 731222 | 77700933 ~ 77725921 (-) |
| rad17 | rad17 | coding | downstream | 797280 | 77645962 ~ 77659863 (-) |
| LOC110536449 | LOC106570861 | coding | upstream | 10049 | 78468533 ~ 78476320 (-) |
| LOC110536450 | LOC106570886 | coding | upstream | 26632 | 78485116 ~ 78487202 (-) |
| cnot6l | cnot6l | coding | upstream | 316081 | 78774565 ~ 78797212 (-) |
| LOC110536655 | LOC106570895 | coding | upstream | 736389 | 79194873 ~ 79224499 (-) |
| LOC110535130 | LOC106570891 | coding | upstream | 800827 | 79259311 ~ 79265496 (-) |
| G1020789 | NA | non-coding | downstream | 1275 | 78453588 ~ 78455868 (-) |
| G1020767 | NA | non-coding | downstream | 53090 | 78403285 ~ 78404053 (-) |
| G1020763 | NA | non-coding | downstream | 65794 | 78389240 ~ 78391349 (-) |
| G1020719 | NA | non-coding | downstream | 118133 | 78322958 ~ 78339010 (-) |
| G1020796 | NA | non-coding | upstream | 21621 | 78480105 ~ 78480631 (-) |
| G1020813 | NA | non-coding | upstream | 51666 | 78510150 ~ 78510530 (-) |
| G1021075 | NA | non-coding | upstream | 59556 | 78518040 ~ 78518259 (-) |
| G1021095 | NA | non-coding | upstream | 89115 | 78547599 ~ 78552566 (-) |
| G1021104 | NA | non-coding | upstream | 113714 | 78572198 ~ 78572586 (-) |
| ccdc125 | ccdc125 | other | downstream | 829577 | 77619098 ~ 77644804 (-) |
| G1019926 | NA | other | downstream | 880479 | 77575871 ~ 77576664 (-) |
| G1019413 | NA | other | downstream | 1500326 | 76955366 ~ 76956817 (-) |
| G1019056 | NA | other | downstream | 1911402 | 76545108 ~ 76545741 (-) |
| ckap2l | LOC106570813 | other | downstream | 2210256 | 76202025 ~ 76246958 (-) |
| G1021084 | NA | other | upstream | 95144 | 78553628 ~ 78566847 (-) |
| G1021129 | NA | other | upstream | 175137 | 78633621 ~ 78634401 (-) |
| G1021664 | NA | other | upstream | 964026 | 79422510 ~ 79423479 (-) |
| G1021853 | NA | other | upstream | 1246735 | 79705219 ~ 79705722 (-) |
