G1021107


Basic Information

Item Value
gene id G1021107
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 78578856 ~ 78579996 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1161609
ACATGAAATTCTccggcaacagttctggtggatatttctgcagtcagcatgccaattgcacgctccctcaaaacttgagacatctgtggcattgtgtgtgaaaaaacagcacattttagagtggcacaAGATTgacctgtgtaatggtcatgctgtttaatcagcttcttgatatgccacacctgtcaggtggatggattatcttggcaaaggacaaatACTCACTAACAGTGAGACATTTTaagaaatttgtgcacaaaagttgagagaaataatctatttgtgcatatggaaaattgtctgggatctttaatttcagctcatgaaacataggaccaacacggTACAAactgcatttatattttggttcagtatagtCAGTcagggtagctattggttaactatttaacattCTGCATTGGCACTTTATCTGTActtatctacctcaattacctcgtacaccTGCACATCAACACAGTACTGGTATCCTGTGTATATAGCGAAGTTATTGTTAATCATTGTGTTTTAACTCCTTTTGCCATTTTACACTAAATGAAATAAAATGTGACTCGAGTATGGTGCCCTCTAGTGGCAGGTTGTCTCACTAGATGCCAAATTAAAAAGCCTGAACACTATCCCACCCAGTTCGCCTTGCCAGGCCACTGACATGAATGTAGGCTATAACTTTCAGCTATGTCCATTATTTCCTGATTTGAAATACAGACCAGACTATTATGGAAATGTGCCTTTCTGTGGTGTCACTCTGACCACAAACTTTGTCCCGCCTTCACGTCTTCTAGAAGGAACTACTGAATCCCTCTACACATTCACTTACCTATTGTTGAATCTAGCCTTTTACCTTCATGTCGTCGACAGTATATCTTGCCCAGGGACTGCAGTTGAAAATGATTTAAAAACActcacttttttttaaacaaaatgttGCACTGCCCCTCCAAAactaacattttaaaaagtgttcCCATTCCAAACACATTTATTCACCCAGCCACAGGGACAAGCTCCCAGCAGCCAGACACCCAGCCACAGGGACAAGCTCCCAGCAGCCAGACACCCAGCCACAGGGACAAGCTCCCAGCAGCCAGACACCCAGCCACAGGGACAAGCTCCCAGCAGCCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1161609 True 1141 lncRNA 0.42 1 78578856 78579996

Neighbor

gene id symbol gene type direction distance location
LOC110536450 LOC106570886 coding downstream 91654 78485116 ~ 78487202 (-)
LOC110536449 LOC106570861 coding downstream 102536 78468533 ~ 78476320 (-)
LOC110536447 LOC106570860 coding downstream 145370 78414793 ~ 78433486 (-)
LOC118936501 LOC106570849 coding downstream 757302 77778061 ~ 77821554 (-)
LOC110535124 LOC106570849 coding downstream 800834 77759929 ~ 77778022 (-)
cnot6l cnot6l coding upstream 194569 78774565 ~ 78797212 (-)
LOC110536655 LOC106570895 coding upstream 614877 79194873 ~ 79224499 (-)
LOC110535130 LOC106570891 coding upstream 679315 79259311 ~ 79265496 (-)
LOC110535133 LOC106570898 coding upstream 1301022 79881016 ~ 79984913 (-)
LOC110535132 LOC106570901 coding upstream 1425387 80005383 ~ 80007650 (-)
G1021063 ube2l3 non-coding downstream 510 78573831 ~ 78578346 (-)
G1021104 NA non-coding downstream 6270 78572198 ~ 78572586 (-)
G1021095 NA non-coding downstream 26290 78547599 ~ 78552566 (-)
G1021075 NA non-coding downstream 60597 78518040 ~ 78518259 (-)
G1020813 NA non-coding downstream 68326 78510150 ~ 78510530 (-)
G1021109 NA non-coding upstream 2900 78582896 ~ 78583145 (-)
G1021111 NA non-coding upstream 8210 78588206 ~ 78588439 (-)
G1021065 NA non-coding upstream 11042 78591038 ~ 78592656 (-)
G1021113 NA non-coding upstream 18586 78598582 ~ 78598820 (-)
G1021114 NA non-coding upstream 20603 78600599 ~ 78601185 (-)
G1021084 NA other downstream 12009 78553628 ~ 78566847 (-)
ccdc125 ccdc125 other downstream 951290 77619098 ~ 77644804 (-)
G1019926 NA other downstream 1002192 77575871 ~ 77576664 (-)
G1019413 NA other downstream 1622039 76955366 ~ 76956817 (-)
G1021129 NA other upstream 53625 78633621 ~ 78634401 (-)
G1021664 NA other upstream 842514 79422510 ~ 79423479 (-)
G1021853 NA other upstream 1125223 79705219 ~ 79705722 (-)
G1022395 LOC106570911 other upstream 1575501 80148560 ~ 80159395 (-)

Expression


Co-expression Network