G1021318


Basic Information

Item Value
gene id G1021318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 79047876 ~ 79049551 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1161869
caagttaaatacaacctaacaccagccttttctaggttaaatacaacctaacaccagccttttccaggttaaatacaacctaacaccagccttttctaggttaaatacaacctaacaccagccttttcTAGGTTAAATAAaacctaacaccagccttttccaagttaaatacaacctaacaccagccttttccagGTTAAATAAaacctaacaccagccttttctaggttaaatacaacctaacaccagccttttccaagttaaatacaacctaacaccagccttttctaggttaaatacaacctaacaccagccttttccaagttaaatacaacctaacaccagcTTTTTCTAggttaaatacaacctaacaccagccttttctaggttaaatacaacctaacaccagccttttccaagttaaatacaacctaacaccagccttttccaggttaaatacaacctaacaccagccttttccgggttaaatacaacctaacaccagccttttccaggttaaatacaacctaacaccagccttttccgggttaaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1161869 True 556 lncRNA 0.38 3 79047876 79049551

Neighbor

gene id symbol gene type direction distance location
cnot6l cnot6l coding downstream 250664 78774565 ~ 78797212 (-)
LOC110536450 LOC106570886 coding downstream 560674 78485116 ~ 78487202 (-)
LOC110536449 LOC106570861 coding downstream 571556 78468533 ~ 78476320 (-)
LOC110536447 LOC106570860 coding downstream 614390 78414793 ~ 78433486 (-)
LOC118936501 LOC106570849 coding downstream 1226322 77778061 ~ 77821554 (-)
LOC110536655 LOC106570895 coding upstream 145322 79194873 ~ 79224499 (-)
LOC110535130 LOC106570891 coding upstream 209760 79259311 ~ 79265496 (-)
LOC110535133 LOC106570898 coding upstream 831467 79881016 ~ 79984913 (-)
LOC110535132 LOC106570901 coding upstream 955832 80005383 ~ 80007650 (-)
areg hbegf coding upstream 996146 80045697 ~ 80063028 (-)
G1021317 NA non-coding downstream 1122 79045947 ~ 79046754 (-)
G1021299 NA non-coding downstream 44815 79002258 ~ 79003061 (-)
G1021290 NA non-coding downstream 67943 78979614 ~ 78979933 (-)
G1021235 NA non-coding downstream 187252 78860054 ~ 78860624 (-)
G1021211 NA non-coding downstream 228381 78809291 ~ 78819495 (-)
G1021368 NA non-coding upstream 77782 79127333 ~ 79169673 (-)
G1021377 NA non-coding upstream 91867 79141418 ~ 79141906 (-)
G1021378 NA non-coding upstream 97268 79146819 ~ 79147345 (-)
G1021381 fras1 non-coding upstream 101743 79151294 ~ 79152104 (-)
G1021393 NA non-coding upstream 124446 79173997 ~ 79174325 (-)
G1021129 NA other downstream 413475 78633621 ~ 78634401 (-)
G1021084 NA other downstream 481029 78553628 ~ 78566847 (-)
ccdc125 ccdc125 other downstream 1420310 77619098 ~ 77644804 (-)
G1019926 NA other downstream 1471212 77575871 ~ 77576664 (-)
G1021664 NA other upstream 372959 79422510 ~ 79423479 (-)
G1021853 NA other upstream 655668 79705219 ~ 79705722 (-)
G1022395 LOC106570911 other upstream 1105946 80148560 ~ 80159395 (-)
G1022578 NA other upstream 1421888 80471439 ~ 80473767 (-)

Expression


Co-expression Network