Gene
RNA
| Item | Value |
|---|---|
| gene id | G1021597 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 79519384 ~ 79576908 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1162243 | True | 236 | lncRNA | 0.42 | 2 | 79519384 | 79576908 |
79,490,000
79,500,000
79,510,000
79,520,000
79,530,000
79,540,000
79,550,000
79,550,000
79,560,000
79,570,000
79,580,000
79,590,000
79,600,000
79,610,000
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536457 | LOC106585928 | coding | upstream | 33122 | 79332879 ~ 79486262 (+) |
| LOC110536458 | LOC106570892 | coding | upstream | 336858 | 79171897 ~ 79182526 (+) |
| fras1 | LOC106585923 | coding | upstream | 352031 | 78815347 ~ 79167353 (+) |
| LOC110536455 | NA | coding | upstream | 706007 | 78804489 ~ 78813377 (+) |
| cxcl13 | cxcl13 | coding | upstream | 747930 | 78770002 ~ 78772053 (+) |
| paqr3a | LOC106570899 | coding | downstream | 284400 | 79861308 ~ 79876704 (+) |
| LOC110536463 | graa | coding | downstream | 444553 | 80021461 ~ 80023984 (+) |
| gc | LOC106570911 | coding | downstream | 559515 | 80136423 ~ 80158994 (+) |
| LOC110535134 | LOC106570910 | coding | downstream | 601598 | 80178506 ~ 80282552 (+) |
| LOC110536468 | lipe | coding | downstream | 753506 | 80330414 ~ 80351180 (+) |
| G1021577 | NA | non-coding | upstream | 31640 | 79487044 ~ 79487744 (+) |
| G1021568 | NA | non-coding | upstream | 56261 | 79461695 ~ 79463123 (+) |
| G1021561 | NA | non-coding | upstream | 80299 | 79436807 ~ 79439085 (+) |
| G1021559 | NA | non-coding | upstream | 87235 | 79431562 ~ 79432149 (+) |
| G1021542 | NA | non-coding | upstream | 133971 | 79385179 ~ 79385413 (+) |
| G1021739 | NA | non-coding | downstream | 9505 | 79586413 ~ 79586656 (+) |
| G1021741 | NA | non-coding | downstream | 10315 | 79587223 ~ 79587699 (+) |
| G1021763 | NA | non-coding | downstream | 39214 | 79616122 ~ 79616340 (+) |
| G1021766 | NA | non-coding | downstream | 41566 | 79618474 ~ 79618785 (+) |
| G1021771 | NA | non-coding | downstream | 46147 | 79623055 ~ 79623292 (+) |
| G1020950 | NA | other | upstream | 647840 | 78870769 ~ 78871544 (+) |
| G1020906 | NA | other | upstream | 758114 | 78760943 ~ 78761270 (+) |
| LOC118937413 | LOC100170204 | other | upstream | 808222 | 78708377 ~ 78711162 (+) |
| LOC100301634 | LOC100135977 | other | upstream | 829703 | 78686700 ~ 78689681 (+) |
| G1021790 | NA | other | downstream | 64014 | 79640922 ~ 79641315 (+) |
| G1021851 | NA | other | downstream | 126334 | 79703242 ~ 79704144 (+) |
| G1021894 | NA | other | downstream | 170134 | 79747042 ~ 79748127 (+) |
| G1021985 | LOC106570898 | other | downstream | 334417 | 79911325 ~ 79919605 (+) |
| G1022153 | NA | other | downstream | 476771 | 80053029 ~ 80054676 (+) |
