Gene
RNA
| Item | Value |
|---|---|
| gene id | G1021763 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 79616122 ~ 79616340 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1162462 | True | 219 | lncRNA | 0.36 | 1 | 79616122 | 79616340 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536457 | LOC106585928 | coding | upstream | 129860 | 79332879 ~ 79486262 (+) |
| LOC110536458 | LOC106570892 | coding | upstream | 433596 | 79171897 ~ 79182526 (+) |
| fras1 | LOC106585923 | coding | upstream | 448769 | 78815347 ~ 79167353 (+) |
| LOC110536455 | NA | coding | upstream | 802745 | 78804489 ~ 78813377 (+) |
| cxcl13 | cxcl13 | coding | upstream | 844668 | 78770002 ~ 78772053 (+) |
| paqr3a | LOC106570899 | coding | downstream | 244968 | 79861308 ~ 79876704 (+) |
| LOC110536463 | graa | coding | downstream | 405121 | 80021461 ~ 80023984 (+) |
| gc | LOC106570911 | coding | downstream | 520083 | 80136423 ~ 80158994 (+) |
| LOC110535134 | LOC106570910 | coding | downstream | 562166 | 80178506 ~ 80282552 (+) |
| LOC110536468 | lipe | coding | downstream | 714074 | 80330414 ~ 80351180 (+) |
| G1021741 | NA | non-coding | upstream | 28423 | 79587223 ~ 79587699 (+) |
| G1021739 | NA | non-coding | upstream | 29466 | 79586413 ~ 79586656 (+) |
| G1021612 | NA | non-coding | upstream | 32605 | 79557688 ~ 79583517 (+) |
| G1021597 | NA | non-coding | upstream | 39214 | 79519384 ~ 79576908 (+) |
| G1021577 | NA | non-coding | upstream | 128378 | 79487044 ~ 79487744 (+) |
| G1021766 | NA | non-coding | downstream | 2134 | 79618474 ~ 79618785 (+) |
| G1021771 | NA | non-coding | downstream | 6715 | 79623055 ~ 79623292 (+) |
| G1021773 | NA | non-coding | downstream | 7573 | 79623913 ~ 79624158 (+) |
| G1021777 | NA | non-coding | downstream | 13170 | 79629510 ~ 79629833 (+) |
| G1021785 | NA | non-coding | downstream | 22497 | 79638837 ~ 79639482 (+) |
| G1020950 | NA | other | upstream | 744578 | 78870769 ~ 78871544 (+) |
| G1020906 | NA | other | upstream | 854852 | 78760943 ~ 78761270 (+) |
| LOC118937413 | LOC100170204 | other | upstream | 904960 | 78708377 ~ 78711162 (+) |
| LOC100301634 | LOC100135977 | other | upstream | 926441 | 78686700 ~ 78689681 (+) |
| G1021790 | NA | other | downstream | 24582 | 79640922 ~ 79641315 (+) |
| G1021851 | NA | other | downstream | 86902 | 79703242 ~ 79704144 (+) |
| G1021894 | NA | other | downstream | 130702 | 79747042 ~ 79748127 (+) |
| G1021985 | LOC106570898 | other | downstream | 294985 | 79911325 ~ 79919605 (+) |
| G1022153 | NA | other | downstream | 437339 | 80053029 ~ 80054676 (+) |
