Gene
RNA
| Item | Value |
|---|---|
| gene id | G1021791 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 79641354 ~ 79641637 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1162490 | True | 284 | lncRNA | 0.37 | 1 | 79641354 | 79641637 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536457 | LOC106585928 | coding | upstream | 155092 | 79332879 ~ 79486262 (+) |
| LOC110536458 | LOC106570892 | coding | upstream | 458828 | 79171897 ~ 79182526 (+) |
| fras1 | LOC106585923 | coding | upstream | 474001 | 78815347 ~ 79167353 (+) |
| LOC110536455 | NA | coding | upstream | 827977 | 78804489 ~ 78813377 (+) |
| cxcl13 | cxcl13 | coding | upstream | 869900 | 78770002 ~ 78772053 (+) |
| paqr3a | LOC106570899 | coding | downstream | 219671 | 79861308 ~ 79876704 (+) |
| LOC110536463 | graa | coding | downstream | 379824 | 80021461 ~ 80023984 (+) |
| gc | LOC106570911 | coding | downstream | 494786 | 80136423 ~ 80158994 (+) |
| LOC110535134 | LOC106570910 | coding | downstream | 536869 | 80178506 ~ 80282552 (+) |
| LOC110536468 | lipe | coding | downstream | 688777 | 80330414 ~ 80351180 (+) |
| G1021785 | NA | non-coding | upstream | 1872 | 79638837 ~ 79639482 (+) |
| G1021777 | NA | non-coding | upstream | 11521 | 79629510 ~ 79629833 (+) |
| G1021773 | NA | non-coding | upstream | 17196 | 79623913 ~ 79624158 (+) |
| G1021771 | NA | non-coding | upstream | 18062 | 79623055 ~ 79623292 (+) |
| G1021766 | NA | non-coding | upstream | 22569 | 79618474 ~ 79618785 (+) |
| G1021794 | NA | non-coding | downstream | 1811 | 79643448 ~ 79643744 (+) |
| G1021797 | NA | non-coding | downstream | 8109 | 79649746 ~ 79650059 (+) |
| G1021816 | NA | non-coding | downstream | 30198 | 79671835 ~ 79672179 (+) |
| G1021856 | NA | non-coding | downstream | 67096 | 79708733 ~ 79708977 (+) |
| G1021857 | NA | non-coding | downstream | 73854 | 79715491 ~ 79715700 (+) |
| G1021790 | NA | other | upstream | 39 | 79640922 ~ 79641315 (+) |
| G1020950 | NA | other | upstream | 769810 | 78870769 ~ 78871544 (+) |
| G1020906 | NA | other | upstream | 880084 | 78760943 ~ 78761270 (+) |
| LOC118937413 | LOC100170204 | other | upstream | 930192 | 78708377 ~ 78711162 (+) |
| G1021851 | NA | other | downstream | 61605 | 79703242 ~ 79704144 (+) |
| G1021894 | NA | other | downstream | 105405 | 79747042 ~ 79748127 (+) |
| G1021985 | LOC106570898 | other | downstream | 269688 | 79911325 ~ 79919605 (+) |
| G1022153 | NA | other | downstream | 412042 | 80053029 ~ 80054676 (+) |
| LOC110536472 | LOC106570904 | other | downstream | 969224 | 80610620 ~ 80617171 (+) |
