Gene
RNA
| Item | Value |
|---|---|
| gene id | G1022137 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 80013362 ~ 80013576 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1162923 | True | 215 | lncRNA | 0.34 | 1 | 80013362 | 80013576 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| paqr3a | LOC106570899 | coding | upstream | 136658 | 79861308 ~ 79876704 (+) |
| LOC110536457 | LOC106585928 | coding | upstream | 527100 | 79332879 ~ 79486262 (+) |
| LOC110536458 | LOC106570892 | coding | upstream | 830836 | 79171897 ~ 79182526 (+) |
| fras1 | LOC106585923 | coding | upstream | 846009 | 78815347 ~ 79167353 (+) |
| LOC110536455 | NA | coding | upstream | 1199985 | 78804489 ~ 78813377 (+) |
| LOC110536463 | graa | coding | downstream | 7885 | 80021461 ~ 80023984 (+) |
| gc | LOC106570911 | coding | downstream | 122847 | 80136423 ~ 80158994 (+) |
| LOC110535134 | LOC106570910 | coding | downstream | 164930 | 80178506 ~ 80282552 (+) |
| LOC110536468 | lipe | coding | downstream | 316838 | 80330414 ~ 80351180 (+) |
| LOC110536469 | LOC106570908 | coding | downstream | 410427 | 80424003 ~ 80467262 (+) |
| G1022122 | NA | non-coding | upstream | 18520 | 79994637 ~ 79994842 (+) |
| G1021989 | NA | non-coding | upstream | 90834 | 79919728 ~ 79922528 (+) |
| G1021982 | NA | non-coding | upstream | 105862 | 79906703 ~ 79907500 (+) |
| G1021979 | NA | non-coding | upstream | 109215 | 79903393 ~ 79904147 (+) |
| G1021978 | NA | non-coding | upstream | 113560 | 79899531 ~ 79899802 (+) |
| G1022149 | NA | non-coding | downstream | 25663 | 80039239 ~ 80039521 (+) |
| G1022151 | NA | non-coding | downstream | 31632 | 80045208 ~ 80052414 (+) |
| G1022153 | NA | non-coding | downstream | 39453 | 80053029 ~ 80054676 (+) |
| G1022154 | hbegf | non-coding | downstream | 41440 | 80055016 ~ 80055459 (+) |
| G1022155 | NA | non-coding | downstream | 42139 | 80055715 ~ 80057049 (+) |
| G1021985 | LOC106570898 | other | upstream | 93757 | 79911325 ~ 79919605 (+) |
| G1021894 | NA | other | upstream | 265235 | 79747042 ~ 79748127 (+) |
| G1021851 | NA | other | upstream | 309218 | 79703242 ~ 79704144 (+) |
| G1021790 | NA | other | upstream | 372047 | 79640922 ~ 79641315 (+) |
| G1020950 | NA | other | upstream | 1141818 | 78870769 ~ 78871544 (+) |
| LOC110536472 | LOC106570904 | other | downstream | 597285 | 80610620 ~ 80617171 (+) |
| G1023251 | NA | other | downstream | 1271442 | 81285018 ~ 81285630 (+) |
| G1023377 | ndufs4 | other | downstream | 1484209 | 81497785 ~ 81543645 (+) |
| G1023978 | NA | other | downstream | 2114313 | 82127889 ~ 82130641 (+) |
