G1022431


Basic Information

Item Value
gene id G1022431
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 80174292 ~ 80225563 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1163329
ctccctccatcactaccacattgtAACAGAAAGACTGtaactccctccatcactaccacattgtaacagaaagactaactccctccatcactaccacattgtAACAGAAAGACCGtaactccctccatcactaccacattgtaacagaaagactaactccctccatcactaccacattgtaacagaactccctccatcactaccacattgtAACAGAAAGACTGtaactccctccatcactaccacattgtaacagaagtccctccatcactaccacattgtAACATAAGTCCCTCCGTCACTACCACATTGTAAGAGAagtccctccatcactaccacattgtaacagaagtccctccatcactaccacattgtAAGAGAAGTCCCTCCGTCACTACCACATTGTAACAGAAGTATCCTGtaactccctccatcactaccacattgtAACAGAAGTATCCTGtaactccctccatcactaccacattgtAACAGAAGTATCCTGtaactccctccatcactaccacattgtaacagaagtccctccatcactaccacattgtAACAGAAGTCTCCTGtaactccctccatcactaccacattgtaacagaagtcTCCTGTAACTCCCTCATTCTACCACATTGTAACAGAAATATCCTGTAACTCCCTCCCATCACTACCACATTGTAACAGAAGTATCCTGtaactccctccatcactaccacattgtAACAGAAGTATCCTGTAACTCCCTCCCATCACTACCACATTGTAACAGAAGTATCCTGTAACTCCCTCCCATCACTACCACATTGTAACAGAAGTATCCTGTAACTCCCTCCCATCACTACCACATTGTAACAGAAGTATCCTGtaactccctccatcactaccacattgtAACAGAAGTAACCTGTAA

Function

NR:

description
PREDICTED: histidine-rich protein PFHRP-II-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1163329 True 919 lncRNA 0.44 3 80174292 80225563

Neighbor

gene id symbol gene type direction distance location
mthfd2l LOC106570897 coding downstream 46465 80101077 ~ 80127827 (-)
LOC118937416 epgn coding downstream 84014 80083983 ~ 80090278 (-)
areg hbegf coding downstream 111264 80045697 ~ 80063028 (-)
LOC110535132 LOC106570901 coding downstream 166642 80005383 ~ 80007650 (-)
LOC110535133 LOC106570898 coding downstream 189379 79881016 ~ 79984913 (-)
LOC110536467 LOC106570909 coding upstream 79999 80305562 ~ 80320403 (-)
LOC110536470 NA coding upstream 244109 80469672 ~ 80483518 (-)
LOC118937419 LOC106570906 coding upstream 462263 80687826 ~ 80689436 (-)
LOC110536477 LOC106570914 coding upstream 495063 80720626 ~ 80772588 (-)
LOC118937420 NA coding upstream 549086 80774649 ~ 80776505 (-)
G1022395 LOC106570911 non-coding downstream 14897 80148560 ~ 80159395 (-)
G1022400 LOC106570911 non-coding downstream 21316 80150666 ~ 80152976 (-)
G1022397 NA non-coding downstream 35993 80129897 ~ 80138299 (-)
G1022416 NA non-coding downstream 54009 80119825 ~ 80120283 (-)
G1022415 NA non-coding downstream 55888 80117270 ~ 80118404 (-)
G1022493 NA non-coding upstream 45538 80271101 ~ 80272682 (-)
G1022494 NA non-coding upstream 47240 80272803 ~ 80273660 (-)
G1022452 NA non-coding upstream 57902 80283465 ~ 80284562 (-)
G1022521 NA non-coding upstream 136234 80361797 ~ 80362041 (-)
G1022532 NA non-coding upstream 160016 80385579 ~ 80440720 (-)
G1021853 NA other downstream 468570 79705219 ~ 79705722 (-)
G1021664 NA other downstream 750813 79422510 ~ 79423479 (-)
G1021129 NA other downstream 1539891 78633621 ~ 78634401 (-)
G1022578 NA other upstream 245876 80471439 ~ 80473767 (-)
G1022584 NA other upstream 262991 80488554 ~ 80489044 (-)
G1022604 NA other upstream 314889 80540452 ~ 80540979 (-)
G1023036 NA other upstream 668339 80893902 ~ 80898003 (-)
G1023156 NA other upstream 914421 81139984 ~ 81140579 (-)

Expression


Co-expression Network