G1022461


Basic Information

Item Value
gene id G1022461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 80208192 ~ 80208461 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1163378
aacttgttctcaactagcctacctggttaaataaaggtgttctcaactggcctacctggttaaataaaggtgttctcaactggcctacctggttaaataaaggtgttctcaactggcctacctggttaaatacaggtgttctcaactagcctacctggttaaatacaggtgttctcaactggcctacctggttaaatacaggtgttctcaactggcctacctggttaaataaaggtg
>TU1163380
aacttgttctcaactagcctacctggttaaataaaggtgttctcaactggcctacctggttaaataaaggtgttctcaactggcctacctggttaaataaaggtgttctcaactggcctacctggttaaatacaggtgttctcaactggcctacctggttaaataaaggtgttctcaactggcctacctggttaaatacaggtgttctcaactggcctacctggttaaataaaggtg

Function

NR:

description
NACHT, LRR and PYD domains-containing protein 12-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1163378 False 237 lncRNA 0.43 2 80208192 80208461
TU1163380 True 237 lncRNA 0.43 2 80208192 80208461

Neighbor

gene id symbol gene type direction distance location
mthfd2l LOC106570897 coding downstream 80365 80101077 ~ 80127827 (-)
LOC118937416 epgn coding downstream 117914 80083983 ~ 80090278 (-)
areg hbegf coding downstream 145164 80045697 ~ 80063028 (-)
LOC110535132 LOC106570901 coding downstream 200542 80005383 ~ 80007650 (-)
LOC110535133 LOC106570898 coding downstream 223279 79881016 ~ 79984913 (-)
LOC110536467 LOC106570909 coding upstream 97101 80305562 ~ 80320403 (-)
LOC110536470 NA coding upstream 261211 80469672 ~ 80483518 (-)
LOC118937419 LOC106570906 coding upstream 479365 80687826 ~ 80689436 (-)
LOC110536477 LOC106570914 coding upstream 512165 80720626 ~ 80772588 (-)
LOC118937420 NA coding upstream 566188 80774649 ~ 80776505 (-)
G1022395 LOC106570911 non-coding downstream 48797 80148560 ~ 80159395 (-)
G1022400 LOC106570911 non-coding downstream 55216 80150666 ~ 80152976 (-)
G1022397 NA non-coding downstream 69893 80129897 ~ 80138299 (-)
G1022416 NA non-coding downstream 87909 80119825 ~ 80120283 (-)
G1022415 NA non-coding downstream 89788 80117270 ~ 80118404 (-)
G1022493 NA non-coding upstream 62640 80271101 ~ 80272682 (-)
G1022494 NA non-coding upstream 64342 80272803 ~ 80273660 (-)
G1022452 NA non-coding upstream 75004 80283465 ~ 80284562 (-)
G1022521 NA non-coding upstream 153336 80361797 ~ 80362041 (-)
G1022532 NA non-coding upstream 177118 80385579 ~ 80440720 (-)
G1021853 NA other downstream 502470 79705219 ~ 79705722 (-)
G1021664 NA other downstream 784713 79422510 ~ 79423479 (-)
G1021129 NA other downstream 1573791 78633621 ~ 78634401 (-)
G1022578 NA other upstream 262978 80471439 ~ 80473767 (-)
G1022584 NA other upstream 280093 80488554 ~ 80489044 (-)
G1022604 NA other upstream 331991 80540452 ~ 80540979 (-)
G1023036 NA other upstream 685441 80893902 ~ 80898003 (-)
G1023156 NA other upstream 931523 81139984 ~ 81140579 (-)

Expression


Co-expression Network