G1022452


Basic Information

Item Value
gene id G1022452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 80283465 ~ 80284562 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1163368
tggcattctctcaaccagcttcatgaggtagtcacctggaatgcatttcaattaactggtgtgccttgttaaaagatcatttgtgaaatttctttccttcttaatgtgtttgagccaatcagttgtgttgtgacaaggtaggagtggtatacagaagataaacctatttgataaaagaccaagtccatattatggcaagaacagctcaaatatgcaaagagaaacgacagtccataatttctttaagacatgaaggtcagtcaatacagaaaatgttcaagaacttttaaagtttcttcaagtgcagtcgcaaaaaccatcaagtgctatgatgagtaagttcattagagttaccagcctcagaaattgcagcccaaataaatggtggaaatctgtcctttggtctgatgagtccaaatgttagatttttagtcccaaccgccatgtctttgtgagaagcagagtaggtgaacggatgatatcagcatgtgtggttcccactgggaagcaaggaggaggaggtgtgatggtgctttgctggtgacactgtctgtgatttatttagaattcaaggcacatttaaccagcatggcttccacatcattctgcagagatacaccatcccatctggtttgtgtttagtgggactatcattttttttcccaacaggacaatgatccaacacacctccaggctgtgcaagggctatttcACTAATATGGAGAGTGatgagtactgcatcagatgacctggcctccaaaatcacccgacctaaacacaattgagatggtttgggatgagttggactgcagagtgaagaaagtactcagcatatgtgggaactccttcaagactgttggaaaagcattccaggtgaagctggttgagagaatgccaagagtgtgcaatgctgtcatctaggcaaagggtggct

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1163368 True 934 lncRNA 0.42 2 80283465 80284562

Neighbor

gene id symbol gene type direction distance location
mthfd2l LOC106570897 coding downstream 155638 80101077 ~ 80127827 (-)
LOC118937416 epgn coding downstream 193187 80083983 ~ 80090278 (-)
areg hbegf coding downstream 220437 80045697 ~ 80063028 (-)
LOC110535132 LOC106570901 coding downstream 275815 80005383 ~ 80007650 (-)
LOC110535133 LOC106570898 coding downstream 298552 79881016 ~ 79984913 (-)
LOC110536467 LOC106570909 coding upstream 21000 80305562 ~ 80320403 (-)
LOC110536470 NA coding upstream 185110 80469672 ~ 80483518 (-)
LOC118937419 LOC106570906 coding upstream 403264 80687826 ~ 80689436 (-)
LOC110536477 LOC106570914 coding upstream 436064 80720626 ~ 80772588 (-)
LOC118937420 NA coding upstream 490087 80774649 ~ 80776505 (-)
G1022494 NA non-coding downstream 9805 80272803 ~ 80273660 (-)
G1022493 NA non-coding downstream 10783 80271101 ~ 80272682 (-)
G1022431 NA non-coding downstream 57902 80174292 ~ 80225563 (-)
G1022461 NA non-coding downstream 75004 80208192 ~ 80208461 (-)
G1022395 LOC106570911 non-coding downstream 124070 80148560 ~ 80159395 (-)
G1022521 NA non-coding upstream 77235 80361797 ~ 80362041 (-)
G1022532 NA non-coding upstream 101017 80385579 ~ 80440720 (-)
G1022579 NA non-coding upstream 187423 80471985 ~ 80474716 (-)
G1022588 NA non-coding upstream 212505 80497067 ~ 80497282 (-)
G1022589 NA non-coding upstream 221021 80505583 ~ 80506477 (-)
G1021853 NA other downstream 577743 79705219 ~ 79705722 (-)
G1021664 NA other downstream 859986 79422510 ~ 79423479 (-)
G1021129 NA other downstream 1649064 78633621 ~ 78634401 (-)
G1022578 NA other upstream 186877 80471439 ~ 80473767 (-)
G1022584 NA other upstream 203992 80488554 ~ 80489044 (-)
G1022604 NA other upstream 255890 80540452 ~ 80540979 (-)
G1023036 NA other upstream 609340 80893902 ~ 80898003 (-)
G1023156 NA other upstream 855422 81139984 ~ 81140579 (-)

Expression


Co-expression Network