Gene
RNA
| Item | Value |
|---|---|
| gene id | G1022579 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 80471985 ~ 80474716 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1163510 | True | 218 | lncRNA | 0.45 | 2 | 80471985 | 80474716 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536467 | LOC106570909 | coding | downstream | 151582 | 80305562 ~ 80320403 (-) |
| mthfd2l | LOC106570897 | coding | downstream | 344158 | 80101077 ~ 80127827 (-) |
| LOC118937416 | epgn | coding | downstream | 381707 | 80083983 ~ 80090278 (-) |
| areg | hbegf | coding | downstream | 408957 | 80045697 ~ 80063028 (-) |
| LOC110535132 | LOC106570901 | coding | downstream | 464335 | 80005383 ~ 80007650 (-) |
| LOC118937419 | LOC106570906 | coding | upstream | 213110 | 80687826 ~ 80689436 (-) |
| LOC110536477 | LOC106570914 | coding | upstream | 245910 | 80720626 ~ 80772588 (-) |
| LOC118937420 | NA | coding | upstream | 299933 | 80774649 ~ 80776505 (-) |
| wdfy3 | wdfy3 | coding | upstream | 303181 | 80777897 ~ 80995990 (-) |
| LOC118937421 | NA | coding | upstream | 329413 | 80804129 ~ 80806161 (-) |
| G1022532 | NA | non-coding | downstream | 31265 | 80385579 ~ 80440720 (-) |
| G1022521 | NA | non-coding | downstream | 109944 | 80361797 ~ 80362041 (-) |
| G1022452 | NA | non-coding | downstream | 187423 | 80283465 ~ 80284562 (-) |
| G1022494 | NA | non-coding | downstream | 198325 | 80272803 ~ 80273660 (-) |
| G1022493 | NA | non-coding | downstream | 199303 | 80271101 ~ 80272682 (-) |
| G1022588 | NA | non-coding | upstream | 22351 | 80497067 ~ 80497282 (-) |
| G1022589 | NA | non-coding | upstream | 30867 | 80505583 ~ 80506477 (-) |
| G1022590 | NA | non-coding | upstream | 32023 | 80506739 ~ 80512478 (-) |
| G1022591 | NA | non-coding | upstream | 38163 | 80512879 ~ 80514779 (-) |
| G1022592 | NA | non-coding | upstream | 44178 | 80518894 ~ 80519271 (-) |
| G1022395 | LOC106570911 | other | downstream | 312590 | 80148560 ~ 80159395 (-) |
| LOC110535133 | LOC106570898 | other | downstream | 571854 | 79881016 ~ 79984913 (-) |
| G1021853 | NA | other | downstream | 766263 | 79705219 ~ 79705722 (-) |
| G1021664 | NA | other | downstream | 1048506 | 79422510 ~ 79423479 (-) |
| G1021129 | NA | other | downstream | 1837584 | 78633621 ~ 78634401 (-) |
| G1022584 | NA | other | upstream | 13838 | 80488554 ~ 80489044 (-) |
| G1022604 | NA | other | upstream | 65736 | 80540452 ~ 80540979 (-) |
| G1023036 | NA | other | upstream | 419186 | 80893902 ~ 80898003 (-) |
| G1023156 | NA | other | upstream | 665268 | 81139984 ~ 81140579 (-) |
| G1023618 | NA | other | upstream | 1140537 | 81615253 ~ 81617939 (-) |
