G1022591


Basic Information

Item Value
gene id G1022591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 80512879 ~ 80514779 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1163522
ccccccccatacacgaTGCATCACAACAATACATTTCACAGGTGCAATGAAGGGGCTTTCAGAAATTGCAATGCACTATGGGACATCACATGGAATCTAGGGCTTCTGGTTAGTTACCTCTGATTTTCTGGAGTGTCATCATAGCTGGTTCCCTAAGTTTAGCCACTAGTCTTTGAACAACGCGTTTAAATACCATGTAGTTAGTGAATCCTGGCAGCTCACTTCCCCTGTGCTTCAGATCATATTCATCCACCACTTGTTGCACTACTTCGTGGTCTAAATGGAGAGAAAAAATACAGAGATTTAGAGAAATTGTTAAATGTTAATAATTTTGGAAAATATAATCGATTATAATTACTTTTTGTATGACGTTACTATTagtataataacaataatattgtGATTGATTAATTCTGTTGTAcacagtggtgtagtagagggtaaaTGCCTGTAGGTGGCGTTTCGCAGAAAAATGCTTTGAAAATACAAGGGacgcttttttttttttcaccgcGAACAGCGATCAATGTTTACTCACCAATTTATTGTTGTGCATCTTACTGGTTGTGTGTCTTACACAGTTAACAATACTAGTGTACATGTCTGTGTACGTGTACTGTAGTATCAGTACAAGTTATGGATATAGACATGTTGAGCTGTAGCCTGTCTATTCAAAAGTGTACCTACAAGTTGGCTTGGCGTTTTGAAGACTTTTCATCCAATCTGCAAATTCACTTCGCATGAGGACAAATATATTTTCCTCGACAGTATTATCCCCGGTGGACAGACGAGTAATCTTCTCATTGAACTCTGTTATGATCTGAAGGGAGAAAAATAACATAAACAACTTCTGACTCCTCTGTAGTTCACATGATCCTCTTTTAAAGAACTAAAGTTAGTTATAGTATTACTTTTagtaacaatgtttatttaattttttatttaaacttgatttaactaggcaagtcagtcaaagaacaaattcttatttacaatgaaggcctaccaaaagtcaaaagacctcctgcggggacgggggctgggatttaaaataaataaacaaaataatatgtatatatgtaaaaatctaggacaaaacacacatcatgacaagagagactacataaagagagacctaagacaacaacatagcaaggcagcaacacatgacaacacagcatggtagcagcacaacatcacaacagcatggtagcaacacaacatcacaacaacatggtagccgcacaacatcacaacaacatggtagcaacacaacatcacaacaacatggtagcaacacaacatcacaacaacatggtagccacacaacaacatggtagcaacacaacatcgTAACAACATGGTAGCcgcacaacatcacaacaacatggtagccgcacaacatcacaacaacatggtagccgcacaacatcacaacaacatggtagccacacaacaacatggtagccgcacaacatcacaacaacatggtagccgcacaacatcacaacaacatggtagccgcacaacatcacaacaacatggtagccgcacaacatcacaacaacatggtagccgcacaaaacatggtacaatgTAATGTTTTAAATTTGAGCAATAATATTGACAACGTTGTGTTATTTGTATGGAGAAAAAAATACTTTACTCCTACTAATGGTGTGTTTGGATCCTTTTCTGAGGAACTCGTAGTTGGTGAAGGCATACGAGTGCTTTTGAAGTCGGAAAAACAATGAAACCAAAGAGATTTTAACTAGATTTGAGCTAGATGCCTAAACTAGCTAACATTGCTAATAATattagtttcctaggaacgcaaagcgaggcggccatctctgtcggcgccggaagaggcg

Function

NR:

description
interferon-induced GTP-binding protein MxB-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1163522 True 1874 lncRNA 0.39 2 80512879 80514779

Neighbor

gene id symbol gene type direction distance location
LOC110536470 NA coding downstream 29361 80469672 ~ 80483518 (-)
LOC110536467 LOC106570909 coding downstream 192476 80305562 ~ 80320403 (-)
mthfd2l LOC106570897 coding downstream 385052 80101077 ~ 80127827 (-)
LOC118937416 epgn coding downstream 422601 80083983 ~ 80090278 (-)
areg hbegf coding downstream 449851 80045697 ~ 80063028 (-)
LOC118937419 LOC106570906 coding upstream 173047 80687826 ~ 80689436 (-)
LOC110536477 LOC106570914 coding upstream 205847 80720626 ~ 80772588 (-)
LOC118937420 NA coding upstream 259870 80774649 ~ 80776505 (-)
wdfy3 wdfy3 coding upstream 263118 80777897 ~ 80995990 (-)
LOC118937421 NA coding upstream 289350 80804129 ~ 80806161 (-)
G1022590 NA non-coding downstream 401 80506739 ~ 80512478 (-)
G1022589 NA non-coding downstream 6402 80505583 ~ 80506477 (-)
G1022588 NA non-coding downstream 15597 80497067 ~ 80497282 (-)
G1022579 NA non-coding downstream 38163 80471985 ~ 80474716 (-)
G1022532 NA non-coding downstream 72159 80385579 ~ 80440720 (-)
G1022592 NA non-coding upstream 4115 80518894 ~ 80519271 (-)
G1022593 NA non-coding upstream 5120 80519899 ~ 80520132 (-)
G1022594 NA non-coding upstream 5486 80520265 ~ 80520567 (-)
G1022595 NA non-coding upstream 6175 80520954 ~ 80521788 (-)
G1022596 NA non-coding upstream 7389 80522168 ~ 80522394 (-)
G1022584 NA other downstream 23835 80488554 ~ 80489044 (-)
G1022578 NA other downstream 39112 80471439 ~ 80473767 (-)
G1022395 LOC106570911 other downstream 353484 80148560 ~ 80159395 (-)
LOC110535133 LOC106570898 other downstream 612748 79881016 ~ 79984913 (-)
G1021853 NA other downstream 807157 79705219 ~ 79705722 (-)
G1022604 NA other upstream 25673 80540452 ~ 80540979 (-)
G1023036 NA other upstream 379123 80893902 ~ 80898003 (-)
G1023156 NA other upstream 625205 81139984 ~ 81140579 (-)
G1023618 NA other upstream 1100474 81615253 ~ 81617939 (-)
G1023858 NA other upstream 1398178 81912957 ~ 81914367 (-)

Expression


Co-expression Network