XLOC_002906 (CT573139.2)


Basic Information

Item Value
gene id XLOC_002906
gene name CT573139.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 34951060 ~ 34959178 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005372
ACCTCCAGCTTTCCAGAAGACATGGCCTGGTCGCTCTTCTTCTTCTTATACTTGTCCTTGTACATTTTATTTCGGTGTTTTTTGCACATCCAGGGTTTCCTGGCTTTGGCCACCTGTGTCGTGGTCTCCGTGCAGCCGTCATAGGTGCAGGTTTTGGGTAGGTTCTCGCTCTCCCCAGAGGTGTCGTCGTCGTTGAGTTCCTCCGGGCTGACCGTTCCGTCCCTCGGCTCCTCCGGGCCGCTCTCCTCGCCCGGATCTTCGGCGTCGTACGGAAAATTCTCGAGGTCGGACGGGGTGGTGCTGCTGTCTGCGGGCCCGGGGGTTTGGCTGTGCTCTTTACCGGTGTTTACTAAACTCAGATGAAGGTTATTACTCATTTTCAAAAGCCGAATCCCTCACCTGTCTTATCCGTAGGAACTAGCCCTTTTTGAGAATTCGCCTCTGAATAATTTATTACAAAATTAATTTTGTGTGTTGGTCATCATAAAATCGCATTTTAAATGTCCGAAGCCTGGTGAACATAATCTCTAAACGGAGGAATAAAAGGCTGCTGTCATgaggacaaaaacaaaacagttatgGCCGCTGCAGAGAGACTGTCGGCTGGACGCTGCGCCATCTAGAGGCTCCACGCGGCGGTTACAGGGTAATGTCTAGAGGGGATACAGCTGCGAAGACTACTACAACAGTAGAGGGACAGCGAGGACACGGTGGATCTCTGTGAGGAAATGCTGCAGATCTCCATGTTGGTGAAGGAGCTGCCGGCGTCGCTGCTGCATTCTGGgtaggaggagctggaggagatGATGTTCTTCAGCCGGTGGAGAGCGATGATGAGGAGGGTGAGCAGGAACAGAAGCAGGCTGAGGAAGATGGAGATGTAGACGTAAACATTAGCAGTCCGTCCGTAGGAGGCAGCGGCCACTCCGGTGGACACGGACACTGTAGGGCTGAAGCGCAGGAAACTCTGGCTGTTCACTTCTGTCGCGTTGTTGAGCTCCTCCACCGAGCCGTCCATCCCAGACATCGCTGACCGCTTTGAGAATCTGCCGGGAAAGGTGGAAACAATTATTCCCTCTGTCTCTGGCATATTTTTTCTATATGTGAAggcaaaattataagccctccagtgaaattttaattcttttttttatatatataggc
>TCONS_00005373
GATTCGAGCACCCCTAAAATGAACGAAATTGTATTAGATTAAAAATATCAACCTGCCAAAACAACAGCAACACATCAAAGTCGACAACGGCACCATTTTAAGCTGACTTGATTCCCTCACAAACAAAAATATCAGGATTAACCGTCCCCTCAGAAACCTCAGGACAGCGAGGACACGGTGGATCTCTGTGAGGAAATGCTGCAGATCTCCATGTTGGTGAAGGAGCTGCCGGCGTCGCTGCTGCATTCTGGgtaggaggagctggaggagatGATGTTCTTCAGCCGGTGGAGAGCGATGATGAGGAGGGTGAGCAGGAACAGAAGCAGGCTGAGGAAGATGGAGATGTAGACGTAAACATTAGCAGTCCGTCCGTAGGAGGCAGCGGCCACTCCGGTGGACACGGACACTGTAGGGCTGAAGCGCAGGAAACTCTGGCTGTTCACTTCTGTCGCGTTGT

Function

GO:

id name namespace
GO:0032869 cellular response to insulin stimulus biological_process
GO:0032870 cellular response to hormone stimulus biological_process
GO:0071375 cellular response to peptide hormone stimulus biological_process
GO:0071417 cellular response to organonitrogen compound biological_process
GO:0043434 response to peptide hormone biological_process
GO:1901652 response to peptide biological_process
GO:1901653 cellular response to peptide biological_process
GO:0008286 insulin receptor signaling pathway biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098015

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005372 False 1164 lncRNA 0.51 2 34951060 34959178
TCONS_00005373 True 460 lncRNA 0.51 2 34951231 34958024

Neighbor

gene id symbol gene type direction distance location
XLOC_002905 sparta coding downstream 34852 34889328 ~ 34916208 (-)
XLOC_002904 ccdc169 coding downstream 62007 34872195 ~ 34889053 (-)
XLOC_002903 dclk1a coding downstream 79323 34737322 ~ 34871737 (-)
XLOC_002902 BX510654.1 coding downstream 623666 34327262 ~ 34327394 (-)
XLOC_002901 pimr167 coding downstream 707791 34220492 ~ 34243269 (-)
XLOC_002907 smad9 coding upstream 1573 34960751 ~ 35002731 (-)
XLOC_002908 supt20 coding upstream 52916 35012094 ~ 35052198 (-)
XLOC_002909 NA coding upstream 95103 35054281 ~ 35058444 (-)
XLOC_002910 C10H21orf91 coding upstream 100678 35059856 ~ 35108683 (-)
XLOC_002911 ripk4 coding upstream 154975 35114153 ~ 35153388 (-)
XLOC_002900 NA non-coding downstream 752494 34196782 ~ 34198566 (-)
XLOC_002891 BX569785.1 non-coding downstream 1070696 33876131 ~ 33880364 (-)
XLOC_002890 NA non-coding downstream 1286271 33663165 ~ 33664789 (-)
XLOC_002885 dre-mir-130a non-coding downstream 1573846 33377130 ~ 33377214 (-)
XLOC_002912 BX465844.1 non-coding upstream 200832 35160010 ~ 35164291 (-)
XLOC_002917 NA non-coding upstream 353714 35312892 ~ 35321637 (-)
XLOC_002919 NA non-coding upstream 470326 35429504 ~ 35431655 (-)
XLOC_002922 BX663516.3 non-coding upstream 661155 35620333 ~ 35620449 (-)

Expression


Co-expression Network