XLOC_002907 (smad9)


Basic Information

Item Value
gene id XLOC_002907
gene name smad9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 34960751 ~ 35002731 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005374
ATGCACTCCTCTACCTCCATCACATCGCTCTTCTCCTTCACCAGTCCGGCTGTGAAGCGTCTGCTCGGCTGGAAGCAAGGAGACGAGGAGGAAAAGTGGGCCGAAAAGGCTGTCGATTCCCTCGTGAAGAAGCTGAAGAAGAAGAAAGGAGCGATGGAGGAACTGGAAAAGGCTCTTAGCTGTCCAGGTCAGCCCAGTAAATGCGTGACCATCCCTCGCTCTCTAGACGGAAGGCTCCAGGTGTCTCATCGGAAAGGTTTGCCTCATGTTATTTACTGTAGAGTGTGGCGCTGGCCCGACCTTCAGTCCCACCATGAGCTCAAAGCGCTCGACTGCTGCGAGTTTCCATTCGGATCCAAGCAGAAGGAGATCTGCATCAACCCATATCATTACCGCCGCGTCGAGACGCCAGTTCTACCGCCGGTGCTAGTGCCCCGTCACAGTGAGTTCAACCCTCAGCACAGCCTGCTGGCCAAGTTCAGAAATGCTTCCCTCCACAACGAGCCTCTGATGCCCCAAAATGCCACTTTCCCCGACTCCTTCCCTGCGATGCCCTGCAGCTCCTTCTCTTCATCTCCCTCCAGCTCTTTAAACCCATCTCCCGCTGCGCACAGCTTCCCAAACTCTCCCAGCAGCGCCACTGAGCCCGGCAGCCCTTACCAGATCACAGCTGAGACGCCTCCTCCACCGTACAGTATGATGGAGAGCAGTCCGTCTGAAGACGTGAAGCCCGCAGAGTCTTCAGAGAATAAACTCATCCTGACGGCTCCACAAAGAGACTTGAGGCCAGTGTGTTATGAAGAACCAGAATATTGGTGTTCGGTGGCGTATTATGAACTCAACAACAGGGTTGGTGAGACATTTCACGCCTCTGCCCGAAGCATCTTAGTGGACGGTTTCACAGATCCATCAAACAACAAGAACCGCTTCTGTCTCGGCCTGCTGTCCAACGTCAACCGCAACTCCACCATCGAGCACACGCGCAGACACATAGGAAAAGGTGTGCACTTGTATTATGTGGGAGGAGAGGTGTACGCAGAGTGTCTGAGTGACTCCAGTATTTTCGTTCAGAGTCGGAACTGTAACTATCAGCACGGTTTTCACCCCACCACCGTCTGCAAGATCCCGAGTGGATGCAGCCTGAAGATCTTCAACAACCAGCTGTTTGCCCAGCTGCTCTCACAGTCGGTAAACCACGGCTTTGAAGTGGTGTATGAACTCACCAAGATGTGCACCATCAGGATGAGTTTCGTCAAGGGCTGGGGAGCCGAGTACCACCGTCAGGACGTCACCAGCACCCCCTGCTGGATAGAAATCCACCTGCACGGGCCCCTGCAGTGGCTGGACAAAGTTCTGACCCAAATGGGCTCCCCACACAACCCCATTTCCTCGGTGTCCTAATACAATACAGGAGACAATTCTCCAATAGACTTCATAGCCACGCAAGACACATagcactctctctcactctcttgtGAAAATATATGTCTTTAGTGGATGTTTATGGTACCGTTATAGGATCAGCCTGAAAATACGTACAATATCATGCTGTTAACTAAGCAGTCGTGTTATTAGATAAGTGTTGCATTGTTTTAAATGGCTACATAAAAAACACTACTACTTGACAGTATGTAATAGCTGAGATCTAATAGGAAGCCAAAGAAATGTGCTAGTAGGCAGGTACTTGTTCTGACAGTGTTTTATTTGCCATATGCCGTCTATAACGTTTAAACTTAGCTGTCTTGTTTTTGTAATACAAAACAAATGCCTCCTTTTTATTTGTGCCTTTTTGATTTTTGACCtgaacacaaatataatattaaaaacaaacaaaagttgaGATGTCTACTCGCTTTTCAAGCTAAAAACTGTCATTCATAAATATCAGAGGATctgtaaaaatgcatttgattGCTTTAGcagacttaaaaataataataaagcagacTGAACACaacataggctgtttttttctgcTTTACAATTAACAAGATGTGGATGggcaagttaaaaaaaatctcaaagagATTTGATCAGTAACACTATCATAGAATACATTAAGATCATTGAATTGATGAATGTTCTCtagtgttcattaaaaatccTAACTGACCTCATGTGGACGAACAGAATTGTACAGTAGATTTAGCTGCTGATTTGTTTCATGATATGAAAGCTCTTCACGGATGAGATCCTGCAGTTTTGCTGATAGTCTCCACTGCATTCAGGACCACTGCAGGTACCCCATGCTGACAGCATCAATATGCAGTATtcacaaaaaatgttaaaaagggaCTGTATGAAATGTTGGTCAGCTTCAGTGTTCAGAAGTTGTGCTGTGTTTGAGAGCGGTTCTGCGTGGTCAGTAAACGCTGCTGCAGCTGGAGGAAACTGATGACTTCTGGACTCCTCAGCAGAGActgaaaagcaaaaacaacacaacatcaGCTGCTGGTAAGTCACTTTGCTAAGAGTTCATAAGTTGAGTTTGAGAAATATTAAGGACATCTGTAATGCATTCAAATATGCAAAACTTGGTTTAAAAGAATATAAAAGCAATATAGcataggcagacagacagataaatctgagtatttaaaattatattaatgttGTCAGCTAAGAGGAAAATATCTAATTCACCTATTCAGCTACATAGTTactatactttttaaaaagaatattcttaaa
>TCONS_00005375
CCAAAAGGCGCATCACTTCCTGTGACAGGGACAACATCTGTCCGCGCcttaaatcaaattaaaagtgAAACACCGCTGCCCACAGTGTGtgacctgtgtttctctgagaggaGCTACTCTTTTGAATGGGATGatcccagtgtttgtgtgtgtgtctgtctgccgTCCTGGGAGAGATCCAGGAGCAGCGGATGAATCCAGCACGCAGGCGCTGAGGCTCCAGTCAGACTGACGCCGCTGCATCCAAACACACGCGCCCGCTGAACACCTCCAGTCGGCGCGGGACCCAGCGCTCGGCGGCGCGGAGCTATTATTCGACCCGGCACGCTGAGatAATCACCATCAACCACCTGAAGAAATCATCTCTGTCAGGGCGTTTATCCTACATCATTGTCTACAAGAAACAACCCGAATCTCCTGCACATAAGTGATTTAAAATCAACCCGTTTCACGATGCACTCCTCTACCTCCATCACATCGCTCTTCTCCTTCACCAGTCCGGCTGTGAAGCGTCTGCTCGGCTGGAAGCAAGGAGACGAGGAGGAAAAGTGGGCCGAAAAGGCTGTCGATTCCCTCGTGAAGAAGCTGAAGAAGAAGAAAGGAGCGATGGAGGAACTGGAAAAGGCTCTTAGCTGTCCAGGTCAGCCCAGTAAATGCGTGACCATCCCTCGCTCTCTAGACGGAAGGCTCCAGGTGTCTCATCGGAAAGGTTTGCCTCATGTTATTTACTGTAGAGTGTGGCGCTGGCCCGACCTTCAGTCCCACCATGAGCTCAAAGCGCTCGACTGCTGCGAGTTTCCATTCGGATCCAAGCAGAAGGAGATCTGCATCAACCCATATCATTACCGCCGCGTCGAGACGCCAGTTCTACCGCCGGTGCTAGTGCCCCGTCACAGTGAGTTCAACCCTCAGCACAGCCTGCTGGCCAAGTTCAGAAATGCTTCCCTCCACAACGAGCCTCTGATGCCCCAAAATGCCACTTTCCCCGACTCCTTCCCTGCGATGCCCTGCAGCTCCTTCTCTTCATCTCCCTCCAGCTCTTTAAACCCATCTCCCGCTGCGCACAGCTTCCCAAACTCTCCCAGCAGCGCCACTGAGCCCGGCAGCCCTTACCAGATCACAGCTGAGACGCCTCCTCCACCGTACAGTATGATGGAGAGCAGTCCGTCTGAAGACGTGAAGCCCGCAGAGTCTTCAGAGAATAAACTCATCCTGACGGCTCCACAAAGAGACTTGAGGCCAGTGTGTTATGAAGAACCAGAATATTGGTGTTCGGTGGCGTATTATGAACTCAACAACAGGGTTGGTGAGACATTTCACGCCTCTGCCCGAAGCATCTTAGTGGACGGTTTCACAGATCCATCAAACAACAAGAACCGCTTCTGTCTCGGCCTGCTGTCCAACGTCAACCGCAACTCCACCATCGAGCACACGCGCAGACACATAGGAAAAGGTGTGCACTTGTATTATGTGGGAGGAGAGGTGTACGCAGAGTGTCTGAGTGACTCCAGTATTTTCGTTCAGAGTCGGAACTGTAACTATCAGCACGGTTTTCACCCCACCACCGTCTGCAAGATCCCGAGTGGATGCAGCCTGAAGATCTTCAACAACCAGCTGTTTGCCCAGCTGCTCTCACAGTCGGTAAACCACGGCTTTGAAGTGGTGTATGAACTCACCAAGATGTGCACCATCAGGATGAGTTTCGTCAAGGGCTGGGGAGCCGAGTACCACCGTCAGGACGTCACCAGCACCCCCTGCTGGATAGAAATCCACCTGCACGGGCCCCTGCAGTGGCTGGACAAAGTTCTGACCCAAATGGGCTCCCCACACAACCCCATTTCCTCGGTGTCCTAATACAATACAGGAGACAATTCTCCAATAGACTTCATAGCCACGCAAGACACATagcactctctctcactctcttgtGAAAATATATGTCTTTAGTGGATGTTTATGGTACCGTTATAGGATCAGCCTGAAAATACGTACAATATCATGCTGTTAACTAAGCAGTCGTGTTATTAGATAAGTGTTGCATTGTTTTAAATGGCTACATAAAAAACACTACTACTTGACAGTATGTAATAGCTGAGATCTAATAGGAAGCCAAAGAAATGTGCTAGTAGGCAGGTACTTGTTCTGACAGTGTTTTATTTGCCATATGCCGTCTATAACGTTTAAACTTAGCTGTCTTGTTTTTGTAATACAAAACAAATGCCTCCTTTTTATTTGTGCCTTTTTGATTTTTGACCtgaacacaaatataatattaaaaacaaacaaaagtt
>TCONS_00005376
TATCCAGCCACAAAATGTAGTTGTGTTACCTTACCAACATTTCGCTGCTGGAGCGTTTTCAACTTTTTCCAAAAGGCGCATCACTTCCTGTGACAGGGACAACATCTGTCCGCGCcttaaatcaaattaaaagtgAAACACCGCTGCCCACAGTGTGtgacctgtgtttctctgagaggaGCTACTCTTTTGAATGGGATGatcccagtgtttgtgtgtgtgtctgtctgccgTCCTGGGAGAGATCCAGGAGCAGCGGATGAATCCAGCACGCAGGCGCTGAGGCTCCAGTCAGACTGACGCCGCTGCATCCAAACACACGCGCCCGCTGAACACCTCCAGTCGGCGCGGGACCCAGCGCTCGGCGGCGCGGAGCTATTATTCGACCCGGCACGCTGAGatAATCACCATCAACCACCTGAAGAAATCATCTCTGTCAGGGCGTTTATCCTACATCATTGTCTACAAGAAACAACCCGAATCTCCTGCACATAAGTGATTTAAAATCAACCCGTTTCACGATGCACTCCTCTACCTCCATCACATCGCTCTTCTCCTTCACCAGTCCGGCTGTGAAGCGTCTGCTCGGCTGGAAGCAAGGAGACGAGGAGGAAAAGTGGGCCGAAAAGGCTGTCGATTCCCTCGTGAAGAAGCTGAAGAAGAAGAAAGGAGCGATGGAGGAACTGGAAAAGGCTCTTAGCTGTCCAGGTCAGCCCAGTAAATGCGTGACCATCCCTCGCTCTCTAGACGGAAGGCTCCAGGTGTCTCATCGGAAAGGTTTGCCTCATGTTATTTACTGTAGAGTGTGGCGCTGGCCCGACCTTCAGTCCCACCATGAGCTCAAAGCGCTCGACTGCTGCGAGTTTCCATTCGGATCCAAGCAGAAGGAGATCTGCATCAACCCATATCATTACCGCCGCGTCGAGACGCCAGTTCTACCGCCGGTGCTAGTGCCCCGTCACAGTGAGTTCAACCCTCAGCACAGCCTGCTGGCCAAGTTCAGAAATGCTTCCCTCCACAACGAGCCTCTGATGCCCCAAAATGCCACTTTCCCCGACTCCTTCCCTGCGATGCCCTGCAGCTCCTTCTCTTCATCTCCCTCCAGCTCTTTAAACCCATCTCCCGCTGCGCACAGCTTCCCAAACTCTCCCAGCAGCGCCACTGAGCCCGGCAGCCCTTACCAGATCACAGCTGAGACGCCTCCTCCACCGTACAGTATGATGGAGAGCAGTCCGTCTGAAGACGTGAAGCCCGCAGAGTCTTCAGAGAATAAACTCATCCTGACGGCTCCACAAAGAGACTTGAGGCCAGTGTGTTATGAAGAACCAGAATATTGGTGTTCGGTGGCGTATTATGAACTCAACAACAGGGTTGGTGAGACATTTCACGCCTCTGCCCGAAGCATCTTAGTGGACGGTTTCACAGATCCATCAAACAACAAGAACCGCTTCTGTCTCGGCCTGCTGTCCAACGTCAACCGCAACTCCACCATCGAGCACACGCGCAGACACATAGGAAAAGGTGTGCACTTGTATTATGTGGGAGGAGAGGTGTACGCAGAGTGTCTGAGTGACTCCAGTATTTTCGTTCAGAGTCGGAACTGTAACTATCAGCACGGTTTTCACCCCACCACCGTCTGCAAGATCCCGAGTGGATGCAGCCTGAAGATCTTCAACAACCAGCTGTTTGCCCAGCTGCTCTCACAGTCGGTAAACCACGGCTTTGAAGTGGTGTATGAACTCACCAAGATGTGCACCATCAGGATGAGTTTCGTCAAGGGCTGGGGAGCCGAGTACCACCGTCAGGACGTCACCAGCACCCCCTGCTGGATAGAAATCCACCTGCACGGGCCCCTGCAGTGGCTGGACAAAGTTCTGACCCAAATGGGCTCCCCACACAACCCCATTTCCTCGGTGTCCTAATACAATACAGGAGACAATTCTCCAATAGACTTCATAGCCACGCAAGACACATagcactctctctcactctcttgtGAAAATATATGTCTTTAGTGGATGTTTATGGTACCGTTATAGGATCAGCCTGAAAATACGTACAATATCATGCTGTTAACTAAGCAGTCGTGTTATTAGATAAGTGTTGCATTGTTTTAAATGGCTACATAAAAAACACTACTACTTGACAGTATGTAATAGCTGAGATCTAATAGGAAGCCAAAGAAATGTGCTAGTAGGCAGGTACTTGTTCTGACAGTGTTTTATTTGCCATATGCCGTCTATAACGTTTAAACTTAGCTGTCTTGTTTTTGTAATACAAAACAAATGCCTCCTTTTTATTTGTGCCTTTTTGATTTTTGACCtgaacacaaatataatattaaaaacaaacaaaagtt
>TCONS_00005377
AAACAACAAGAACCGCTTCTGTCTCGGCCTGCTGTCCAACGTCAACCGCAACTCCACCATCGAGCACACGCGCAGACACATAGGAAAAGGTGTGCACTTGTATTATGTGGGAGGAGAGGTGTACGCAGAGTGTCTGAGTGACTCCAGTATTTTCGTTCAGAGTCGGAACTGTAACTATCAGCACGGTTTTCACCCCACCACCGTCTGCAAGATCCCGAGTGGATGCAGCCTGAAGATCTTCAACAACCAGCTGTTTGCCCAGCTGCTCTCACAGTCGGTAAACCACGGCTTTGAAGTGGTGTATGAACTCACCAAGATGTGCACCATCAGGATGAGTTTCGTCAAGGTACAAAGCTTTATAGTGTGAACAGCATTGAACGTTTTGTGAACACTCACTTTGAACAATATAGCAATGTTTTTTGCCTcaaaatgtattttcaaaaaCAGGCTCATGAGATTAAATTCATTTTGCTTTTGATTTATCAAAGAACTGAATCATTAGAgtcaatttatttgtaaataaatc
>TCONS_00005378
GGAAAAGTGGGCCGAAAAGGCTGTCGATTCCCTCGTGAAGAAGCTGAAGAAGAAGAAAGGAGCGATGGAGGAACTGGAAAAGGCTCTTAGCTGTCCAGGTCAGCCCAGTAAATGCGTGACCATCCCTCGCTCTCTAGACGGAAGGCTCCAGGTGTCTCATCGGAAAGGTTTGCCTCATGTTATTTACTGTAGAGTGTGGCGCTGGCCCGACCTTCAGTCCCACCATGAGCTCAAAGCGCTCGACTGCTGCGAGTTTCCATTCGGATCCAAGCAGAAGGAGATCTGCATCAACCCATATCATTACCGCCGCGTCGAGACGCCAGTTCTACCGCCGGTGCTAGTGCCCCGTCACAGTGAGTTCAACCCTCAGCACAGCCTGCTGGCCAAGTTCAGAAATGCTTCCCTCCACAACGAGCCTCTGATGCCCCAAAATGCCACTTTCCCCGACTCCTTCCCTGCGATGCCCTGCAGCTCCTTCTCTTCATCTCCCTCCAGCTCTTTAAACCCATCTCCCGCTGCGCACAGCTTCCCAAACTCTCCCAGCAGCGCCACTGAGCCCGGCAGCCCTTACCAGATCACAGCTGAGACGCCTCCTCCACCGTACAGTATGATGGAGAGCAGTCCGTCTGAAGACGTGAAGCCCGCAGAGTCTTCAGAGAATAAACTCATCCTGACGGCTCCACAAAGAGGTGTGCACTTGTATTATGTGGGAGGAGAGGTGTACGCAGAGTGTCTGAGTGACTCCAGTATTTTCGTTCAGAGTCGGAACTGTAACTATCAGCACGGTTTTCACCCCACCACCGTCTGCAAGATCCCGAGTGGATGCAGCCTGAAGATCTTCAACAACCAGCTGTTTGCCCAGCTGCTCTCACAGTCGGTAAACCACGGCTTTGAAGTGGTGTATGAACTCACCAAGATGTGCACCATCAGGATGAGTTTCGTCAAGGTACAAAGCTTTATAGTGTGAACAGCATTGAACGTTTTGTGAACACTCACTTTGAACAATATAGCAATGTTTTTTGCCTcaaaatgtattttcaaaaaCAGGCTCATGAGATTAAATTCATTTTGCTTTTGATTTATCAAAGAACTGAATCATTAGAgtcaatttatttgtaaataaatc
>TCONS_00005379
ATGTTGACTGAGATATGGAGGATGGAGTTCTGTTTATGTGACTTATTGCAGTATTCGCTGATCCTGGCTTTGGTCGTCTTATTACTGGTTGTTATTGCTGCTCACGTCACTGCGAAGATGGTCGATCAGACTCGCCACGAGAAGGAGAAACAGTTCCTGACTGCAGATGGCAAGCGTGAGGATTTCCCCAGTCTGATGGAGCCTCCTTCAATAGATCTGTCTGTGGTCGTCCCTTCATACAACGAAGAACTCCGATTGCCTGTTATGATGGATGAAGCAATGGACTACCTGGAGAAAAGACAGAAGGAGAATCCGTCGTTCACTTATGAGGTTATTGTTGTAGATGATGGCAGCAAAGACAAAACTACAGAGGTTGCCATGAAATACACCAAGAAGTATGGAGCAAAAAAAGTGAGAGTTTTGACGTTGGTAAAGAACCGTGGAAAAGGGGGTGCAGTGAAAATGGGAACTTTGAGCTGTCGCGGGCGACTTATTCTAATGGCTGATGCTGACGGAGCCACTAAATTTGCTGATGTTGAAAAGGTGGAAGAAGGTCTTGAGAGCATCACAGAGAAGCCTGATAACATGGCCATCTCCTGCGGATCCAGAGCTCACCTAGAAAAAGAATCAGTGGCTCAGCGATCCATGTTCCGGACGTTCCTGATGTATGGATTCCACTTCCTGGTGTGGTTCTTCTGTGTGAGGGGGATTAAAGACACACAGTGTGGTTTTAAGCTCTTCACTCGTGAGGCTGCTCTGAAAACCTTCTCCAGTCTGCATGTGGAGCGCTGGGCGTTTGATGTGGAGCTTCTCTTCATTGCTCAGTGTTTTGATATCCCTATTGAGGAGGTGGCTGTTAACTGGACAGAGATTGAAGGGTCAAAGTTGGTGCCGTTCTGGAGTTGGCTACAGATGGGTCGTGATCTAATCTTTATCAGACTGCGTTACCTCACTGGTGCCTGGAGACTGGAGTCTGAGAAGAAAACTCAATAGCTGATGTTACAGCTAGTGTGCTGTTCGTGAGCTAGCATTGCCACAAATGAGTACACTGCGAACGCAATCGGTGAACAGCaaccattagcattttattaTCACTGACCGTGCCGAGATCACAAAAGGGGATTGTCTTTCTATTTTTGTTATGCTGTTTTCCATGTTTTTCTTTTACATAATGTATTAGTTTGGTTTCAAAAAAGCAGATGGTTCTTGGCcaaataaaaaccaaaacaaatcatTAAGTGTTTTTGCATTTGCAACTATTAAGAAAACATTGCACGGATGATGAGTTTCACATTAGAAAAGCAGATTTCATTTAATGCTGagattaataattgtaatttgaAAAGAAACTAATTAGGATGTTTAAAATCAGTGGcacacaaatatacactcaccggccactttattaggtacacctttctagtaccaggttggacccccttttgcctttagcaCTGCCtttatcctttgtggcatagattcaacaaggtgctggaaatattcctcagagattttgatccatattgacatgatagcatcacgcagttgcttcagatttgtcggctgcacatccatgattctcccattccaccacatcccaaaggtgctctattggattgtggtctagtgactgtgaaggccttgtgagtacagtgaactcattgtcatgttcaagaaaccagtctgagatgattcgcatgttatcctgctagaagtagccatcacaagatgggtacactgtgatcataaagggatggacatggttagcaacaacAGTCAGGTAGGCTGTGCCgttaacacaatgctcaattggtactaatgggcttaAAGTGTGCTAAGAATATATCgcttacaccattacaccaccaccagcagcctgaactgttaatacatGGCAGGATGGAACCATGCttccatgttgttgatgccaaattctgaccttaccatgtgaatgttgcagcaaaaatcgagacttgtcagaccaggcaacgtttttgcagtcttctattgtcctcagtttcctgttctaagctgacaggagtggcacccagtgtggtcttctgctgctgtagccgtCCGTCTCAGGTTGGATGTgctgtgcatttagagatgcccATTTggatacctcggttgtaacgagtggttatttgagtaactgttgccttcctatcagctggaaccagtctggccattctcctctggcatcgacaaggcatttgcgcctacagaactgccgctcagtggatattttgtctttttcgcaccattctctgtaaaccctagaaatggttttGTGCgcgaaaatctcagtagatcagcagtttctgaaatactcagatcagcccatctggcaccaccaaccatgccacgtccaaagtcacctaaatcacctttcttattcttccccattctgatgctctgtttgaactgcagcatatcgtcttgaccatgtctacatgcctaaatgcatcgagttgctgccatgtgattggctgattagatttTTGCGTTGACgtttggacaggtgtgcctaataaagtggccggtgagtatacatTTTATAACACCCACGCATACAAACACAGTTGACTGAAATGTCGCCCTGTCTGGCATGTATTCAGGGGATTTTAATGTGGTTTACTCAATGGTCTGCTCTGCACCCTGGGGAGACCATCCTGTTTGTCCTCCCTTTCTCTCCACCAGGAAGGCATTTGTTCCTGTCAGGCACTCCAAAAGAGGTTATGTTACAATATTTCACATgggacatttattttttttagattaaaagaTAAAAGCTGCTTTTGAAGTATTGTATTGTCCCCAGTAAACGTAAAGCCTCGTCAGTAATGTACATAATCCTGTGTGCACCTTGATTGAACAGGATCGTTTTGCGGTGTGCTTTTATTGAAGGCAGATTCCCCCCTGCCAGACTTATTTGATCAAAGAGAGCTCTAAATATGCGAGCTGTCATTATTGGGAGTATTGTTACGTTCCCCTGCAGTTGTTgtaaactgtgaaaatgtcaaaCTTCTAGACTCTCTGTCGCCATCCTGGCTTGCGTCATTAACTGGACAAGTCACTGTACGCACACAATCGAAGTGTATCCATCCGCGCAGAGGAGGGCGAGGAAAAATAGGGCTATCGATAAACAGCTTGGCGCTCCGCCAATCTGGCAACCCGTCTGTTTTGCGTTAACAATGCGAATTTATGATTTACACGAAAGTCTGCAAGCATACAACAGATATATTTTCACTAAATAgctgttttaaactatttatgAGATTAATTGaatgtaactattttaatatTAGGCTTCACAGTTCCATGTTGAAACAGGTCGATGCTCCctattaataagttaataaggCTTGAGCCTCTCAATGGAATCCAAAACAAATACTAATTTTGACAATATATAGGAATACGAGAATATATAGTGCTCAGACAGCTTCTCATTCTGTCAGACAGTATTTTCACTTTAGGTTTTCAAAAAGCTCACAAACAACTCAGAAGTTTACTACTAAAATTTTAGTGGGAAGCCGCTCACGTGATTAATGTTGTTCCGCTTCAGCATCCTCCTCCGATGATTCACTGACTAAACGTCACACTATTTATGACCTTTTGtctaataaataacaaacatGACAAAGTCATTTGAAAAATTGATCGTAGTAGTTTTGCGTTTGTATTTTAAAGGGGTAAGTTAGGTCGCCCCCAAAAAAGATCATTTCGGACGTCGATGgctgttttcttcaaaatatctttcgtgttccacagaagaaactATTTGAAAAATGTGGgagtgttaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataaaactaAATAAGCGCTATATATGTGCTAAAATATCACAATGGAACCAGATAACGTTCTGTAAAAAAAGTAAAGTTATAACAATAAAACGACTTTTTCTTGTACCATATTAAgcgttaaattaattaaaattaacaacATGCGTGcagttttgttagtttgttgatgtcttaaaggaattgttcactctaaaaaataaaaaagatcactttattcatcaacttgttccaaactagattgagtttcttctgttgaaaagaaaaataaatatttcacagaatGTTGTAGTCATTGATTTCCATagcatatttgtttttcctactatgggaatcaatggttacaggttttcaacattcttcaaagtatcttttttttGCGTATGACCAAAAAATGCCAAAAGTTTAGAAAAACAGTAAATAGTGaatagtttttactttttatggtgaactattacttttaaaatgtaatcaaataattAGTCTcgttgtttttctgtttattatttcAATAGTTCAAACCTAGGTTTagaggacattttaaaagtgggggacAGCTGAATGAGATCTAAAAGTTTACGTTCATatttattaatcacctgtttctaaatggacTGGCTGAGTGATTGGGACGTATTCCACCCACCCCATACGCTCCCCAGTATCCAGCCACAAAATGTAGTTGTGTTACCTTACCAACATTTCGCTGCTGGAGCGTTTTCAACCACATAAGTAAGtttagacaaaataataataacaaacactaTTGTGTTCAATTTCAAAGAATATTTCATTTGAACGTATAATCTAACAATGTCGTGAAAATCTAACCACTTTCACTTTGCAGCTTTTTCCAAAAGGCGCATCACTTCCTGTGACAGGGACAACATCTGTCCGCGCcttaaatcaaattaaaagtgAAACACCGCTGCCCACAGTGTGtgacctgtgtttctctgagaggaGCTACTCTTTTGAATGGGATGatcccagtgtttgtgtgtgtgtctgtctgccgTCCTGGGAGAGATCCAGGAGCAGCGGATGAATCCAGCACGCAGGCGCTGAGGCTCCAGTCAGACTGACGCCGCTGCATCCAAACACACGCGCCCGCTGAACACCTCCAGTCGGCGCGGGACCCAGCGCTCGGCGGCGCGGAGCTATTATTCGACCCGGCACGCTGAGGTAAGGGATAAAACGCGTTTTATGTACcactattaatgttgttttgtacTTAAAACTTAAATGCCAGAGTTTGATAAGATGACAAAACACATGTAGCCTACTTTAAACTCGTTTAGATATAATTTATAAGATATTTTATAAAGTTACTTAACGTTACTTATTTGAAGTACAACGGACGTTACTTAACTTATTTTAAGTCATTGCACCGGGA
>TCONS_00005380
GCTATTTCAGTTGGTCACGGCGGAATCTGCGCTTTCTTCGCCCGCTGTGATCATGGCTGTGATGATGTGGTTTGTCAAGGCGACTTCCGCGTAGGTGTTTCTCTGTGACTGGAAGTAAAGTTCAACAATGGAGATTTAAGTATTTATTCCGTAATTTAGTACGACATCCATTCATATATGTCCCGCCTCGAGAAGTCACAGAGAGGCTGTTTTTAACGCTCCGCGTGCTTTAACTGAGCGGTAAACTGCTGTCAGCGTCTCTGCAGAGCAATATGTTGACTGAGATATGGAGGATGGAGTTCTGTTTATGTGACTTATTGCAGTATTCGCTGATCCTGGCTTTGGTCGTCTTATTACTGGTGTTGTTATTGCTGCTCACGTCACTGCGAAGATGGTCGATCAGACTCGCCACGAGAAGGAGAAACAGTTCCTGACTGCAGATGGCAAGCGTGAGGATTTCCCCAGTCTGATGGAGCCTCCTTCAATAGATCTGTCTGTGGTCGTCCCTTCATACAACGAAGAACTCCGATTGCCTGTTATGATGGATGAAGCAATGGACTACCTGGAGAAAAGACAGAAGGAGAATCCGTCGTTCACTTATGAGGTTATTGTTGTAGATGATGGCAGCAAAGACAAAACTACAGAGGTTGCCATGAAATACACCAAGAAGTATGGAGCAAAAAAAGTGAGAGTTTTGACGTTGGTAAAGAACCGTGGAAAAGGGGGTGCAGTGAAAATGGGAACTTTGAGCTGTCGCGGGCGACTTATTCTAATGGCTGATGCTGACGGAGCCACTAAATTTGCTGATGTTGAAAAGGTGGAAGAAGGTCTTGAGAGCATCACAGAGAAGCCTGATAACATGGCCATCTCCTGCGGATCCAGAGCTCACCTAGAAAAAGAATCAGTGGCTCAGCGATCCATGTTCCGGACGTTCCTGATGTATGGATTCCACTTCCTGGTGTGGTTCTTCTGTGTGAGGGGGATTAAAGACACACAGTGTGGTTTTAAGCTCTTCACTCGTGAGGCTGCTCTGAAAACCTTCTCCAGTCTGCATGTGGAGCGCTGGGCGTTTGATGTGGAGCTTCTCTTCATTGCTCAGTGTTTTGATATCCCTATTGAGGAGGTGGCTGTTAACTGGACAGAGATTGAAGGGTCAAAGTTGGTGCCGTTCTGGAGTTGGCTACAGATGGGTCGTGATCTAATCTTTATCAGACTGCGTTACCTCACTGGTGCCTGGAGACTGGAGTCTGAGAAGAAAACTCAATAGCTGATGTTACAGCTAGTGTGCTGTTCGTGAGCTAGCATTGCCACAAATGAGTACACTGCGAACGCAATCGGTGAACAGCaaccattagcattttattaTCACTGACCGTGCCGAGATCACAAAAGGGGATTGTCTTTCTATTTTTGTTATGCTGTTTTCCATGTTTTTCTTTTACATAATGTATTAGTTTGGTTTCAAAAAAGCAGATGGTTCTTGGCcaaataaaaaccaaaacaaatca
>TCONS_00005381
AAAAAAGTGAGAGTTTTGACGTTGGTAAAGAACCGTGGAAAAGGGGGTGCAGTGAAAATGGGAACTTTGAGCTGTCGCGGGCGACTTATTCTAATGGCTGATGCTGACGGAGCCACTAAATTTGCTGATGTTGAAAAGGTGGAAGAAGGTCTTGAGAGCATCACAGAGAAGCCTGATAACATGGCCATCTCCTGCGGATCCAGAGCTCACCTAGAAAAAGAATCAGTGGCTCAGCGATCCATGTTCCGGACGTTCCTGATGTATGGATTCCACTTCCTGGTGTGGTTCTTCTGTGTGAGGGGGATTAAAGACACACAGTGTGGTTTTAAGCTCTTCACTCGTGAGGCTGCTCTGAAAACCTTCTCCAGTCTGCATGTGGAGCGCTGGGTCAAAGTTGGTGCCGTTCTGGAGTTGGCTACAGATGGGTCGTGATCTAATCTTTATCAGACTGCGTTACCTCACTGGTGCCTGGAGACTGGAGTCTGAGAAGAAAACTCAATAGCTGATGTTACAGCTAGTGTGCTGTTCGTGAGCTAGCATTGCCACAAATGAGTACACTGCGAACGCAATCGGTGAACAGCaaccattagcattttattaTCACTGACCGTGCCGAGATCACAAAAGGGGATTGTCTTTCTATTTTTGTTATGCTGTTTTCCATGTTTTTCTTTTACATAATGTATTAGTTTGGTTTCAAAAAAGCAGATGGTTCTTGGCcaaataaaaaccaaaacaaatc
>TCONS_00005382
AGAAGTATGGAGCAAAAAAAGTGAGAGTTTTGACGTTGGTAAAGAACCGTGGAAAAGGGGGTGCAGTGAAAATGGATAACATGGCCATCTCCTGCGGATCCAGAGCTCACCTAGAAAAAGAATCAGTGGCTCAGCGATCCATGTTCCGGACGTTCCTGATGTATGGATTCCACTTCCTGGTGTGGTTCTTCTGTGTGAGGGGGATTAAAGACACACAGTGTGGTTTTAAGCTCTTCACTCGTGAGGCTGCTCTGAAAACCTTCTCCAGTCTGCATGTGGAGCGCTGGGCGTTTGATGTGGAGCTTCTCTTCATTGCTCAGTGTTTTGATATCCCTATTGAGGAGGTGGCTGTTAACTGGACAGAGATTGAAGGGTCAAAGTTGGTGCCGTTCTGGAGTTGGCTACAGATGGGTCGTGATCTAATCTTTATCAGACTGCGTTACCTCACTGGTGCCTGGAGACTGGAGTCTGAGAAGAAAACTCAATAGCTGATGTTACAGCTAGTGTGCTGTTCGTGAGCTAGCATTGCCACAAATGAGTACACTGCGAACGCAATCGGTGAACAGCaaccattagcattttattaTCACTGACCGTGCCGAGATCACAAAAGGGGATTGTCTTTCTATTTTTGTTATGCTGTTTTCCATGTTTTTCTTTTACATAATGTATTAGTTTGGTTTCAAAAAAGCAGATGGTTCTTGGCcaaataaaaaccaaaacaaatc

Function

symbol description
smad9 Predicted to enable DNA binding activity and metal ion binding activity. Acts upstream of or within dorsal/ventral pattern formation; myeloid cell development; and negative regulation of transcription, DNA-templated. Predicted to be located in cytoplasm and nucleus. Predicted to be part of transcription regulator complex. Is expressed in several structures, including cardiovascular system; gut; nervous system; optic vesicle; and periderm. Used to study arteriovenous malformations of the brain. Human ortholog(s) of this gene implicated in primary pulmonary hypertension. Orthologous to human SMAD9 (SMAD family member 9).

GO:

id name namespace
GO:0007179 transforming growth factor beta receptor signaling pathway biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0061515 myeloid cell development biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005515 protein binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
ko04350 TGF-beta signaling pathway
ko04550 Signaling pathways regulating pluripotency of stem cells

ZFIN:

id description
ZDB-GENE-030131-6586 Predicted to enable dolichyl-phosphate beta-glucosyltransferase activity. Predicted to be involved in protein N-linked glycosylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human ALG5 (ALG5 dolichyl-phosphate beta-glucosyltransferase).
ZDB-GENE-031014-1 Predicted to enable DNA binding activity and metal ion binding activity. Acts upstream of or within dorsal/ventral pattern formation; myeloid cell development; and negative regulation of transcription, DNA-templated. Predicted to be located in cytoplasm and nucleus. Predicted to be part of transcription regulator complex. Is expressed in several structures, including cardiovascular system; gut; nervous system; optic vesicle; and periderm. Used to study arteriovenous malformations of the brain. Human ortholog(s) of this gene implicated in primary pulmonary hypertension. Orthologous to human SMAD9 (SMAD family member 9).

Ensembl:

ensembl_id ENSDARG00000021938 ENSDARG00000061235

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005374 False 2691 mRNA 0.45 6 34960751 34976812
TCONS_00005375 False 2291 mRNA 0.50 7 34961604 34981028
TCONS_00005376 False 2359 mRNA 0.50 8 34961604 34981219
TCONS_00005377 False 526 lncRNA 0.43 2 34965764 34969903
TCONS_00005378 False 1126 lncRNA 0.50 4 34965764 34976723
TCONS_00005379 False 5365 mRNA 0.41 10 34980486 35002459
TCONS_00005380 False 1508 mRNA 0.46 10 34984617 35002731
TCONS_00005381 False 742 processed_transcript 0.45 5 34984618 34992414
TCONS_00005382 True 728 lncRNA 0.45 5 34984618 34992428

Neighbor

gene id symbol gene type direction distance location
XLOC_002906 CT573139.2 coding downstream 1573 34951060 ~ 34959178 (-)
XLOC_002905 sparta coding downstream 44543 34889328 ~ 34916208 (-)
XLOC_002904 ccdc169 coding downstream 71698 34872195 ~ 34889053 (-)
XLOC_002903 dclk1a coding downstream 89014 34737322 ~ 34871737 (-)
XLOC_002902 BX510654.1 coding downstream 633357 34327262 ~ 34327394 (-)
XLOC_002908 supt20 coding upstream 9363 35012094 ~ 35052198 (-)
XLOC_002909 NA coding upstream 51550 35054281 ~ 35058444 (-)
XLOC_002910 C10H21orf91 coding upstream 57125 35059856 ~ 35108683 (-)
XLOC_002911 ripk4 coding upstream 111422 35114153 ~ 35153388 (-)
XLOC_002912 BX465844.1 coding upstream 157279 35160010 ~ 35164291 (-)
XLOC_002900 NA non-coding downstream 762185 34196782 ~ 34198566 (-)
XLOC_002891 BX569785.1 non-coding downstream 1080387 33876131 ~ 33880364 (-)
XLOC_002890 NA non-coding downstream 1295962 33663165 ~ 33664789 (-)
XLOC_002917 NA non-coding upstream 310161 35312892 ~ 35321637 (-)
XLOC_002919 NA non-coding upstream 426773 35429504 ~ 35431655 (-)
XLOC_002922 BX663516.3 non-coding upstream 617602 35620333 ~ 35620449 (-)

Expression


Co-expression Network