G1024299


Basic Information

Item Value
gene id G1024299
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 82190375 ~ 82223441 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1165599
GATGAGCTTAACGCTGGCATTTCaaatttatttgactattttgaAAAAATGGAGAAATGTAATTCAGGCACACAAGTGGATTGACCCCATGTTAACCGTGTAGGTCTGCACCCTAAAATAGCATGGTTTAGTGGATTGACCCCATGTTAACCGTGTAGGTCTGCACCCTAAAATAGCATGGTTTAATGGATTGACCCCATGTTAACCGTGTAGGTCTGCACCCTAAAATAGCATGGTTTAATGGATTGACCCCATGTTAACCGTGTAGGTCTGCACCCTAAAATAGCATGGTTTAATGGATTGACCCCATGTTAACCTTGTAGGTCTGTACCATTTAGATAACATGGTTTTAATGTATTGACCCCATGTTAAAATAATAAtgttaaaataataaaaaatctaatcaaatttgtcacgtacacatggttagcagatgttaatggtcacatacacatggttagcaaatgttaatgcgagtgtagcgaaatgcttgttgcttctagttccgacaatgcagatgtagattaccaacgagtaatctaacctaacaattccacaactactactttatacacacaagtgtaaagggataaagaatatgtacataaagatatatgaatgagtgatggtacagagcggcataggcaagatgcagtagatggtatcgagtgcagtatatacatatgagatgagtatgtaaacaaagtggcatagtttaaagtggctagtgatacatgtattacataaagatgcagtagatgatatagagtac
>TU1165601
atacagggagtaccagataaatgtggagctatatacagggagtaccagatcaatgtggagctatatacagggagtaccagatcaatgtggagctatatacagggagtaccagatcaatgtagagctatatacagggagtaccagatcaatgtagagctatatacagggagtaccagtaccagatcaatgtagagctatatacagggagtaccagatcaatgtagagctatatacagggagtaccagtaccagatcaatgtagagctatatacagggagtaccagatcaatgtggagctatacatgactgacttcatgtcttaaagtaatgctggactgtcgtttctctttacttatttgacctgttcttaccataatatggacttggtcttttaccaaatagggctatcttctgtgtaacaaccctaccatgtcacaacacaactgattggctcaaacgcattaagaaggaaagaaattccacaaattaacttttaacaaggcacacctattaattgaaatgcattccaggtgactacctcatgaaactggttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1165599 False 772 lncRNA 0.37 2 82190375 82191201
TU1165601 True 554 lncRNA 0.40 3 82217968 82223441

Neighbor

gene id symbol gene type direction distance location
LOC118937423 NA coding downstream 31132 82157654 ~ 82159243 (-)
LOC110536483 isl1 coding downstream 262161 81920366 ~ 81928214 (-)
LOC118937459 NA coding downstream 379262 81810059 ~ 81811117 (-)
LOC118937401 NA coding downstream 402835 81764643 ~ 81787540 (-)
fsta LOC100301657 coding downstream 618776 81558951 ~ 81571599 (-)
LOC110536485 NA coding upstream 29087 82252528 ~ 82257457 (-)
LOC110536484 LOC106570928 coding upstream 34389 82257489 ~ 82522382 (-)
LOC110536491 LOC106570936 coding upstream 306795 82530236 ~ 82563337 (-)
LOC110536490 zfr coding upstream 358275 82581716 ~ 82619626 (-)
LOC118937424 NA coding upstream 644660 82868101 ~ 82871020 (-)
G1024294 NA non-coding downstream 13202 82176218 ~ 82177173 (-)
G1024289 NA non-coding downstream 24337 82165635 ~ 82166038 (-)
G1024244 NA non-coding downstream 118294 82069350 ~ 82072081 (-)
G1023939 NA non-coding downstream 129265 82060869 ~ 82061110 (-)
G1023933 NA non-coding downstream 131118 82059055 ~ 82059257 (-)
G1024359 NA non-coding upstream 103245 82326686 ~ 82328866 (-)
G1024368 NA non-coding upstream 130773 82354214 ~ 82359457 (-)
G1024391 NA non-coding upstream 192420 82415861 ~ 82416430 (-)
G1024393 NA non-coding upstream 202658 82426099 ~ 82426671 (-)
G1023858 NA other downstream 276008 81912957 ~ 81914367 (-)
G1023618 NA other downstream 573146 81615253 ~ 81617939 (-)
G1023156 NA other downstream 1049796 81139984 ~ 81140579 (-)
G1023036 NA other downstream 1292372 80893902 ~ 80898003 (-)
G1022604 NA other downstream 1649396 80540452 ~ 80540979 (-)
G1025481 NA other upstream 1338861 83562302 ~ 83565574 (-)
G1025467 NA other upstream 1398282 83544297 ~ 83626790 (-)
G1025498 NA other upstream 1492242 83683265 ~ 83718776 (-)
ypel1 ypel1 other upstream 1650459 83873900 ~ 83903039 (-)

Expression


Co-expression Network