G1024469



Basic Information


Item Value
gene id G1024469
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 82527118 ~ 82527415 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1165815
gtttcaatgtcttcactattattctacaatgtagaaaatggtacaaataaataaaaaccctggaatgagtagttattctaaaacttttgaccagtagtgtacatAGCTACCACTTCTGCTCAGCTCAACAGGCACAACGCTATGTAACCATACAGGCACAGCGCTATGTAACTATACAGGCACAACGCTATGTAACTATACTGGCACAACGCTATGTAACTATAGCAAATTAATTTGAACTAGACGCCAG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1165815 True 250 lncRNA 0.38 2 82527118 82527415

Neighbor


gene id symbol gene type direction distance location
LOC110536484 LOC106570928 coding downstream 4736 82257489 ~ 82522382 (-)
LOC110536485 NA coding downstream 269661 82252528 ~ 82257457 (-)
LOC110535140 parp8 coding downstream 281944 82160968 ~ 82245174 (-)
LOC118937423 NA coding downstream 367875 82157654 ~ 82159243 (-)
LOC110536483 isl1 coding downstream 598904 81920366 ~ 81928214 (-)
LOC110536491 LOC106570936 coding upstream 2821 82530236 ~ 82563337 (-)
LOC110536490 zfr coding upstream 54301 82581716 ~ 82619626 (-)
LOC118937424 NA coding upstream 340686 82868101 ~ 82871020 (-)
LOC118937425 NA coding upstream 345307 82872722 ~ 82873724 (-)
LOC100136308 LOC106570939 coding upstream 346364 82873779 ~ 82962031 (-)
G1024447 NA non-coding downstream 14645 82512248 ~ 82512473 (-)
G1024444 NA non-coding downstream 19536 82507201 ~ 82507582 (-)
G1024443 NA non-coding downstream 19939 82506978 ~ 82507179 (-)
G1024438 NA non-coding downstream 27042 82499548 ~ 82500076 (-)
G1024437 NA non-coding downstream 27572 82499146 ~ 82499546 (-)
G1024491 NA non-coding upstream 85357 82612772 ~ 82613190 (-)
G1024458 LOC106570933 non-coding upstream 97681 82625096 ~ 82627337 (-)
G1024459 NA non-coding upstream 100955 82628370 ~ 82629232 (-)
G1024496 NA non-coding upstream 104866 82632281 ~ 82632519 (-)
G1024502 NA non-coding upstream 134618 82662033 ~ 82662821 (-)
G1023858 NA other downstream 612751 81912957 ~ 81914367 (-)
G1023618 NA other downstream 909889 81615253 ~ 81617939 (-)
G1023156 NA other downstream 1386539 81139984 ~ 81140579 (-)
G1023036 NA other downstream 1629115 80893902 ~ 80898003 (-)
G1025481 NA other upstream 1034887 83562302 ~ 83565574 (-)
G1025467 NA other upstream 1094308 83544297 ~ 83626790 (-)
G1025498 NA other upstream 1188268 83683265 ~ 83718776 (-)
ypel1 ypel1 other upstream 1346485 83873900 ~ 83903039 (-)
G1026586 NA other upstream 2659911 85187326 ~ 85197500 (-)

Expression



Co-expression Network