Gene
RNA
| Item | Value |
|---|---|
| gene id | G1025460 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 83510115 ~ 83511276 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Repetitive proline-rich cell wall protein 2, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1167044 | True | 493 | lncRNA | 0.55 | 3 | 83510115 | 83511276 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536498 | LOC105030224 | coding | downstream | 149101 | 83341427 ~ 83361014 (-) |
| LOC110536507 | LOC105014547 | coding | downstream | 221166 | 83064063 ~ 83288949 (-) |
| LOC100136308 | LOC106570939 | coding | downstream | 548084 | 82873779 ~ 82962031 (-) |
| LOC118937425 | NA | coding | downstream | 636391 | 82872722 ~ 82873724 (-) |
| LOC118937424 | NA | coding | downstream | 639095 | 82868101 ~ 82871020 (-) |
| LOC118937426 | LOC100380868 | coding | upstream | 183404 | 83692703 ~ 83698034 (-) |
| ypel1 | ypel1 | coding | upstream | 364658 | 83873900 ~ 83903039 (-) |
| LOC110536511 | NA | coding | upstream | 403537 | 83914813 ~ 83921303 (-) |
| LOC110535142 | mapk1 | coding | upstream | 411332 | 83922608 ~ 83982640 (-) |
| grsf1 | grsf1 | coding | upstream | 534236 | 84045512 ~ 84084200 (-) |
| G1025452 | NA | non-coding | downstream | 5250 | 83494517 ~ 83504865 (-) |
| G1025454 | NA | non-coding | downstream | 8321 | 83496617 ~ 83501794 (-) |
| G1025444 | NA | non-coding | downstream | 38992 | 83470720 ~ 83471123 (-) |
| G1025415 | NA | non-coding | downstream | 126527 | 83383256 ~ 83383588 (-) |
| G1025412 | NA | non-coding | downstream | 141586 | 83367767 ~ 83368529 (-) |
| G1025461 | NA | non-coding | upstream | 8700 | 83519976 ~ 83521180 (-) |
| G1025465 | NA | non-coding | upstream | 29366 | 83540642 ~ 83542556 (-) |
| G1025467 | NA | non-coding | upstream | 33021 | 83544297 ~ 83626790 (-) |
| G1025477 | NA | non-coding | upstream | 44245 | 83555521 ~ 83557131 (-) |
| G1025482 | NA | non-coding | upstream | 54318 | 83565594 ~ 83566054 (-) |
| LOC110536484 | LOC106570928 | other | downstream | 1251150 | 82257489 ~ 82522382 (-) |
| G1023858 | NA | other | downstream | 1595748 | 81912957 ~ 81914367 (-) |
| G1023618 | NA | other | downstream | 1892886 | 81615253 ~ 81617939 (-) |
| G1023156 | NA | other | downstream | 2369536 | 81139984 ~ 81140579 (-) |
| G1023036 | NA | other | downstream | 2612112 | 80893902 ~ 80898003 (-) |
| G1025481 | NA | other | upstream | 51026 | 83562302 ~ 83565574 (-) |
| G1025498 | NA | other | upstream | 204407 | 83683265 ~ 83718776 (-) |
| G1026586 | NA | other | upstream | 1676050 | 85187326 ~ 85197500 (-) |
