G1025467


Basic Information

Item Value
gene id G1025467
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 83544297 ~ 83626790 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1167056
tgtcctcatgctcagttgtgcaccggggtctcccactcctctttctattctggttagaaccagtttgcgctgttctgtgaagggagtagtacacagcattgtacgaggtctttagtttctttgcaatttctcacatggaatagctgtgctaacataattgcaaaagggttgtttaatgatcaattagccttttaaaatgataaacttggattagctaacacaacgtgccattggaacacaggagtgatggttgctgataatgggcctctatgcctatgtagatattccatttaaaaataaGCCATTATCCAGCTcagatagtcatttacaacattaacaatgtctacactgtatttctgttcaatttgatgttattttaatggacaaacaaatgtgcttttctttaaaaaaaaaacaaggacatttctcagtgaccaaagcttttgaacgatagtgtaccTGTACCATATGACTTGTAAGGAAGCCCTCCATTCAGATACACGCATCACTACAATGTGGAACTGCATTGGCACTAAGGTGAAGAACCAAATATTGGAGAATGTCAAACAAGCAGTACAGAATAGTTGGCATATAAACAAAAACAATATATTGTTTACAATAAAAGTACTGTTTACCGAACACATCCAAATATTGAATAATCTGCAAaacattattataattttttactttatttgCAACCATAATTATTATCAAAAGAATATAGTCTAAATTCACTCATTGAAAACTTTCTTTTGTACTAATACCCAGTTTTACAAAAGTAAATCTATGCTTACTAGTTGGAGCGAGTCCATCTCATAACAGTCATCAGCTTTATTCAGTCTTTTCAGTTGTTTTGTGATTCTATAGTTCCATAGAATGTTCTAGATTGTTCAAACAGTGATTCTGAATTCCATTTCAGCTGATCAGGAGCTGCATTTTTAATCTATTCAAAAAAAGCATGTGGTCCCTACTCCAAGAGACAGCGTTAGAATATCACTGACATAGTGCCTTTATGTACAAAAACAATGTACAAATCTATATAAAACAATCTAACGTTAGCCTCTACATCTCACTATATCTGttgtaaataaatatttggtTGTCTGACTTCATTATGTAGGAAATAGTTGAATCCACGGTAAAGGCTTGTTAGGTGTTCTTTGACTCTATCTAGCTACCAGAGAGACATGCACCTATGCTGGTGTTTGGAAAGGCCTCACTAGTGGACTAACCCAAATGGTACccgattccctatgtagtgcaccactgttgaccagagccctattccctatgtagtgcactactttaggccagggcTCGAGCTCTGCTCAAAAGTAATGCAGTATATATGTAATAGGGGGCCATTTTTAGTGGCTCTCTCTCAGTGACTATAACAGACAATACCAACGTCTAGTCAGATGGATAGCTACCAAGCCTTCATTGGTTGTCTGTGATGAGACAGAGGTACAGTATCTTGCCTTGTGATGTAAAAACACTATGCTTGGTCACCATAGACTATGGTTGTGTCACACATGTCatcatattccctttatagtgcactacatttggctagggcccataggactgtggtccaaagtagtgcactacattagggaatagggcaccatctGGGACGCAGCTTGTATCTAATGTTTGTCAGGCTAGGAGGTGAAGGTGATCCCATGATGTAGTAATCCTCCTCTcagagccatcctcccctcctctcagatcGTGACAGGTCCTCCTCTCAGATCGAGACAGGTCCTCCTCTCAGATCGAGACAGGTCCTCCTCTCAGATCGTGACAGGTCCTCCTCTCAGATAGTGGGTGCTGTTACACTTGGCGGATGCAGAAGTAGCAGCACAAATTCAACTACAACACTTAAATACAAGATATtcacagaaaaaaaaaactaGGCTATAGCCTTAGGAGCAAATTGCTCAAATTGCTTGTTTTTTTGCTCATGATGTTGACCATTCCTTTCCAAGCCCTGAATGTATGAAATATAGCTTACTTTCTTTTTTCAACATTAAAAGAAAGTCTATCAATATGTATATTTTATGGATCAACAATCTCAAATAAACAGATGTGTGTTATGCACTCTATACACCACAACATCTGGCTTTGGAATAAAATCTCTCTCTATAGCAGCCAAGgcaatatgtatgtatgtatacgtGATGTTCACATACAATAAGTAACAATAAAATAGTTAAGGACATAGACACTGTAACATATAGCCATGTCgtacagagaggacaggaggaagaggaggaagaggaagaggaagaggaggaggagag
>TU1167055
tgtcctcatgctcagttgtgcaccggggtctcccactcctctttctattctggttagaaccagtttgcgctgttctgtgaagggagtagtacacagcattgtacgaggtctttagtttctttgcaatttctcacatggaatagctgtgctaacataattgcaaaagggttgtttaatgatcaattagccttttaaaatgataaacttggattagctaacacaacgtgccattggaacacaggagtgatggttgctgataatgggcctctatgcctatgtagatattccatttaaaaataaGCCATTATCCAGCTcagatagtcatttacaacattaacaatgtctacactgtatttctgttcaatttgatgttattttaatggacaaacaaatgtgcttttctttaaaaaaaaaacaaggacatttctcagtgaccaaagcttttgaacgatagtgtaccTGTACCATATGACTTGTAAGGAAGCCCTCCATTCAGATACACGCATCACTACAATGTGGAACTGCATTGGCACTAAGGTGAAGAACCAAATATTGGAGAATGTCAAACAAGCAGTACAGAATAGTTGGCATATAAACAAAAACAATATATTGTTTACAATAAAAGTACTGTTTACCGAACACATCCAAATATTGAATAATCTGCAAaacattattataattttttactttatttgCAACCATAATTATTATCAAAAGAATATAGTCTAAATTCACTCATTGAAAACTTTCTTTTGTACTAATACCCAGTTTTACAAAAGTAAATCTATGCTTACTAGTTGGAGCGAGTCCATCTCATAACAGTCATCAGCTTTATTCAGTCTTTTCAGTTGTTTTGTGATTCTATAGTTCCATAGAATGTTCTAGATTGTTCAAACAGTGATTCTGAATTCCATTTCAGCTGATCAGGAGCTGCATTTTTAATCTATTCAAAAAAAGCATGTGGTCCCTACTCCAAGAGACAGCGTTAGAATATCACTGACATAGTGCCTTTATGTACAAAAACAATGTACAAATCTATATAAAACAATCTAACGTTAGCCTCTACATCTCACTATATCTGttgtaaataaatatttggtTGTCTGACTTCATTATGTAGGAAATAGTTGAATCCACGGTAAAGGCTTGTTAGGTGTTCTTTGACTCTATCTAGCTACCAGAGAGACATGCACCTATGCTGGTGTTTGGAAAGGCCTCACTAGTGGACTAACCCAAATGGTACccgattccctatgtagtgcaccactgttgaccagagccctattccctatgtagtgcactactttaggccagggcTCGAGCTCTGCTCAAAAGTAATGCAGTATATATGTAATAGGGGGCCATTTTTAGTGGCTCTCTCTCAGTGACTATAACAGACAATACCAACGTCTAGTCAGATGGATAGCTACCAAGCCTTCATTGGTTGTCTGTGATGAGACAGAGGTACAGTATCTTGCCTTGTGATGTAAAAACACTATGCTTGGTCACCATAGACTATGGTTGTGTCACACATGTCatcatattccctttatagtgcactacatttggctagggcccataggactgtggtccaaagtagtgcactacattagggaatagggcaccatctGGGACGCAGCTTGTATCTAATGTTTGTCAGGCTAGGAGGTGAAGGTGATCCCATGATGTAGTAATCCTCCTCTcagagccatcctcccctcctctcagatcGTGACAGGTCCTCCTCTCAGATCGAGACAGGTCCTCCTCTCAGATCGAGACAGGTCCTCCTCTCAGATCGTGACAGGTCCTCCTCTCAGATAGTGGGTGCTGTTACACTTGGCGGATGCAGAAGTAGCAGCACAAATTCAACTACAACACTTAAATACAAGATATtcacagaaaaaaaaaactaGGCTATAGCCTTAGGAGCAAATTGCTCAAATTGCTTGTTTTTTTGCTCATGATGTTGACCATTCCTTTCCAAGCCCTGAATGTATGAAATATAGCTTACTTTCTTTTTTCAACATTAAAAGAAAGTCTATCAATATGTATATTTTATGGATCAACAATCTCAAATAAACAGATGTGTGTTATGCACTCTATACACCACAACATCTGGCTTTGGAATAAAATCTCTCTCTATAGCAGCCAAGgcaatatgtatgtatgtatacgtGATGTTCACATACAATAAGTAACAATAAAATAGTTAAGGACATAGACACTGTAACATATAGCCATGTCgtacagagaggacaggaggaagaggaggaagaggaagaggaggaggagagggggacgtgaaggtgggaggaggaggaggaggaggaggagagggggacgcgaaggtgggaggaggaggaggaggttctTAGGTAATGGTATAAAACTATTCAGAACTGGCGTGGAAGGAGTTAGGATATAGCATGTGTCTGACCTCCTCAGTAAGAGGAAAAGTTTCTGTTCAACCCAGTAGAGGCAGTAGTCTACTGAGGTCCTCTGTTAGTCCCACTGAGGCAGTAGTCTACTGAAGTCCTCTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTCTGTTAGTCCCACTGAGGCAGTAGTCTACGGAGGTCCTGTGTTAGTCCCACTGAGGCAGTAGTCTACTGAAGTCCTCTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTCTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTGTGTTAGTCCAACTGAGGCAGTAGTCTACTGAAGTCCTCTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTCTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTCTGTTAGTCCCACTGAGGCAATAGTCTACGGAGGTCCTGTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTCTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTGTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTGTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTGTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTGTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTGTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTGTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTGTGTTAGTCCCACTGAGGCAGTAGTCTACTGAGGTCCTCTGTTGGTCCAGATCTGTCAGGAAACCCATCTGGAGTTCCTAAGTCTTTCAATACGTTTTTTTGTCCCTCTGCAATAGGTCCTGTTTTATTGTGTTCAAACAGGCAATAAACCCTGATGATGAGGTTGGTGATgagggtggtgatgatgatgatgaagatgagacTAGTGAGTTGTTTATTCTCCAGGGTGCTTCAGCATTCTACAGGGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTACAGGGTGCTTCAGTATTCTCCAGAGTGCTTCAGCATTCTCCATAGTGCTTCAGCGTTCTCCAGGGTGCTTCAGAGTTCTCCAGGGTGCTTCAGCATTCTCCATAGTACTTCAGCATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTACAGGGCGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTACAGGGTGCTTCAGTATTCTACAGGGTGCTTCAGCATTCTCCAGAGTGCTTCAGCTTTCTCCAGGGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTACAGGATGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTACAGGGTGCTTCAGTATTCTACAGGGTGCTTCAGTATTCTCCAGGGTGCTTCAGTATTCTACAGGGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGGGTGCTTCAGTATTCTACAGGGTGCTTCAGCATTCTCCAGAGTGCTTCAGCTTTCTCCAGGGTGCTTCAGTATTCTACAGGGTGCTTCAGTATTCTCCAGAGTGCTTCAGTATTCTCCAGGGTGCTTCAGTATTCTACAGGGTGCTTCAGCATTCTCCAGAGTGCTTC

Function

NR:

description
PREDICTED: involucrin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1167056 False 2303 lncRNA 0.39 5 83544297 83626790
TU1167055 True 4299 TUCP 0.43 8 83621723 83626790

Neighbor

gene id symbol gene type direction distance location
LOC110536498 LOC105030224 coding downstream 183283 83341427 ~ 83361014 (-)
LOC110536507 LOC105014547 coding downstream 255348 83064063 ~ 83288949 (-)
LOC100136308 LOC106570939 coding downstream 582266 82873779 ~ 82962031 (-)
LOC118937425 NA coding downstream 670573 82872722 ~ 82873724 (-)
LOC118937424 NA coding downstream 673277 82868101 ~ 82871020 (-)
LOC118937426 LOC100380868 coding upstream 67890 83692703 ~ 83698034 (-)
ypel1 ypel1 coding upstream 249144 83873900 ~ 83903039 (-)
LOC110536511 NA coding upstream 288023 83914813 ~ 83921303 (-)
LOC110535142 mapk1 coding upstream 295818 83922608 ~ 83982640 (-)
grsf1 grsf1 coding upstream 418722 84045512 ~ 84084200 (-)
G1025465 NA non-coding downstream 1741 83540642 ~ 83542556 (-)
G1025461 NA non-coding downstream 23117 83519976 ~ 83521180 (-)
G1025460 NA non-coding downstream 33021 83510115 ~ 83511276 (-)
G1025452 NA non-coding downstream 39432 83494517 ~ 83504865 (-)
G1025454 NA non-coding downstream 42503 83496617 ~ 83501794 (-)
G1025521 NA non-coding upstream 4522 83631312 ~ 83632287 (-)
G1025520 LOC100380868 non-coding upstream 10205 83636995 ~ 83644402 (-)
G1025533 NA non-coding upstream 16433 83643223 ~ 83643522 (-)
G1025497 LOC100380868 non-coding upstream 39555 83666345 ~ 83668159 (-)
G1025514 NA non-coding upstream 41466 83668256 ~ 83668994 (-)
LOC110536484 LOC106570928 other downstream 1285332 82257489 ~ 82522382 (-)
G1023858 NA other downstream 1629930 81912957 ~ 81914367 (-)
G1023618 NA other downstream 1927068 81615253 ~ 81617939 (-)
G1023156 NA other downstream 2403718 81139984 ~ 81140579 (-)
G1023036 NA other downstream 2646294 80893902 ~ 80898003 (-)
G1025498 NA other upstream 88893 83683265 ~ 83718776 (-)
G1026586 NA other upstream 1560536 85187326 ~ 85197500 (-)
G1026978 NA other upstream 1986562 85613352 ~ 85614375 (-)
G1025482 NA non-coding downstream 55669 83565594 ~ 83566054 (-)
G1025477 NA non-coding downstream 64592 83555521 ~ 83557131 (-)
G1025481 NA other downstream 56149 83562302 ~ 83565574 (-)

Expression


Co-expression Network