G1025558


Basic Information

Item Value
gene id G1025558
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 83724748 ~ 83725297 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1167188
CCTGAATGGATTGATTGGATTTATTTGAGAATTTAAAAAGTTGAAGGTTGGTCCTACCGGAGACAGCGAGGGAGTTAAGGGTACCAGGTTTAAGCCCATGACTTGATCTGGAAAAAGCAGTGAAGGAGGAGCATAGAACAGTAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCACATATAGAACAGTAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCACATATAGAACAGTAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCACATATAGAACAGTAATCTGCTTCACATATAGAACAGTAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCACATATAGAACAGTAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCACATATAGAACAATAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCTCAAATAGAACAGTAATCTGCTTCTCAAATAGAACAGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106560634 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1167188 True 550 lncRNA 0.36 1 83724748 83725297

Neighbor

gene id symbol gene type direction distance location
LOC118937426 LOC100380868 coding downstream 28142 83692703 ~ 83698034 (-)
LOC110536498 LOC105030224 coding downstream 363734 83341427 ~ 83361014 (-)
LOC110536507 LOC105014547 coding downstream 435799 83064063 ~ 83288949 (-)
LOC100136308 LOC106570939 coding downstream 762717 82873779 ~ 82962031 (-)
LOC118937425 NA coding downstream 851024 82872722 ~ 82873724 (-)
ypel1 ypel1 coding upstream 150637 83873900 ~ 83903039 (-)
LOC110536511 NA coding upstream 189516 83914813 ~ 83921303 (-)
LOC110535142 mapk1 coding upstream 197311 83922608 ~ 83982640 (-)
grsf1 grsf1 coding upstream 320215 84045512 ~ 84084200 (-)
adamts3 LOC107719190 coding upstream 509996 84235293 ~ 84426152 (-)
G1025557 NA non-coding downstream 1896 83722626 ~ 83722852 (-)
G1025498 NA non-coding downstream 5972 83683265 ~ 83718776 (-)
G1025514 NA non-coding downstream 55754 83668256 ~ 83668994 (-)
G1025497 LOC100380868 non-coding downstream 56589 83666345 ~ 83668159 (-)
G1025559 NA non-coding upstream 270 83725567 ~ 83726081 (-)
G1025560 NA non-coding upstream 2512 83727809 ~ 83728203 (-)
G1025563 LOC106600668 non-coding upstream 11971 83737268 ~ 83737630 (-)
G1025566 NA non-coding upstream 15755 83741052 ~ 83741284 (-)
G1025569 NA non-coding upstream 26426 83751723 ~ 83752221 (-)
G1025467 NA other downstream 97958 83544297 ~ 83626790 (-)
G1025481 NA other downstream 159174 83562302 ~ 83565574 (-)
LOC110536484 LOC106570928 other downstream 1465783 82257489 ~ 82522382 (-)
G1023858 NA other downstream 1810381 81912957 ~ 81914367 (-)
G1026586 NA other upstream 1462029 85187326 ~ 85197500 (-)
G1026978 NA other upstream 1888055 85613352 ~ 85614375 (-)

Expression


Co-expression Network