G1025607


Basic Information

Item Value
gene id G1025607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 83843899 ~ 83845257 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1167250
GGGGCGCACAGTACtaagagccatgactacatggaactgtaTTCCACAGTCCtaagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtacaacatagagccatgactacatggaactctattccacagtactacatagagccatgaccacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactgtaTTCCACAGTCCtaagagccatgactacatggaactctattccacagtCCtaagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatgtaactctattccacagtactacatagagccatgactacatgtaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgaccacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatgaaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacatcaggtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1167250 True 1113 lncRNA 0.42 2 83843899 83845257
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118937426 LOC100380868 coding downstream 147293 83692703 ~ 83698034 (-)
LOC110536498 LOC105030224 coding downstream 482885 83341427 ~ 83361014 (-)
LOC110536507 LOC105014547 coding downstream 554950 83064063 ~ 83288949 (-)
LOC100136308 LOC106570939 coding downstream 881868 82873779 ~ 82962031 (-)
LOC118937425 NA coding downstream 970175 82872722 ~ 82873724 (-)
ypel1 ypel1 coding upstream 30677 83873900 ~ 83903039 (-)
LOC110536511 NA coding upstream 69556 83914813 ~ 83921303 (-)
LOC110535142 mapk1 coding upstream 77351 83922608 ~ 83982640 (-)
grsf1 grsf1 coding upstream 200255 84045512 ~ 84084200 (-)
adamts3 LOC107719190 coding upstream 390036 84235293 ~ 84426152 (-)
G1025606 NA non-coding downstream 730 83842914 ~ 83843169 (-)
G1025605 NA non-coding downstream 1062 83842601 ~ 83842837 (-)
G1025602 NA non-coding downstream 5392 83838114 ~ 83838507 (-)
G1025600 NA non-coding downstream 11307 83832381 ~ 83832592 (-)
G1025597 NA non-coding downstream 30602 83812432 ~ 83813297 (-)
G1025610 NA non-coding upstream 4456 83849713 ~ 83852488 (-)
G1025612 NA non-coding upstream 7656 83852913 ~ 83853635 (-)
G1025615 NA non-coding upstream 10429 83855686 ~ 83856097 (-)
G1025619 NA non-coding upstream 14603 83859860 ~ 83860071 (-)
G1025620 NA non-coding upstream 15402 83860659 ~ 83860932 (-)
G1025498 NA other downstream 125291 83683265 ~ 83718776 (-)
G1025467 NA other downstream 217109 83544297 ~ 83626790 (-)
G1025481 NA other downstream 278325 83562302 ~ 83565574 (-)
LOC110536484 LOC106570928 other downstream 1584934 82257489 ~ 82522382 (-)
G1023858 NA other downstream 1929532 81912957 ~ 81914367 (-)
G1026586 NA other upstream 1342069 85187326 ~ 85197500 (-)
G1026978 NA other upstream 1768095 85613352 ~ 85614375 (-)

Expression

G1025607 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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G1025607 Expression in each Bioproject

Bar chart with 20 bars.
G1025607 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network