G1025735 (fbxl8)


Basic Information

Item Value
gene id G1025735
gene name fbxl8
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 84136245 ~ 84137394 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1167412
TGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGTGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGGGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGGGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGGGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGTGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGGGTGTGATTAGTTGTCATTTAATAACAGTGCATCGCCAGGTGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGTGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGTGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGTGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGGGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAAGGGTGTGATTGGTTGTCATTTAATAACAGTGCATCTCCAGGGGTGTGATTGGTTGTCATTTAATAACAGTGCATCGCCAGGGGTGTGGCTCTTTGCGTGTCTTCAGTGTGTATCTCCACAGGCGAGGGCAGCCGTCTTTAAAGGCCCTGATGACATCACACGACACCACACAGTAACAGTGGACCTCTCTGAGGAGGCTGCAGGCTGCGGCCAGGGAGCGCAGGGCGGAGTCCAGCTCTGGAGACGAGGTGGTCTGCAGTATGATTGTCTCCAGGGCGTGGCTGTAGCTCTGGGTGACCAGGTGTGTCTGCTGGACCAGGTCAGTAAATGTGAGGAGTTCCAGGTGCTGCAGAGGAACGCTGGGCTGCAATACGGAGCTGAAATGATCCATGGGAAGAGTGTGGTCCAATATCAGGCTTACCTGGAATATAATACACATATTACTACAACTTACTACAACATATTACAACATATTACACATTAATACACATAGTACTACAACATTACACATTCATACACATATTACTACAACATACTACaacatattacacatattactACAACATATTACAACATATTACACATTAATAC

Function

symbol description
fbxl8 Predicted to be involved in several processes, including G2/M transition of mitotic cell cycle; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; and entrainment of circadian clock by photoperiod. Predicted to be part of SCF ubiquitin ligase complex. Predicted to be active in cytosol and nucleus. Orthologous to human FBXL8 (F-box and leucine rich repeat protein 8).

NR:

description
F-box/LRR-repeat protein 8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1167412 True 1070 lncRNA 0.44 2 84136245 84137394

Neighbor

gene id symbol gene type direction distance location
grsf1 grsf1 coding downstream 52045 84045512 ~ 84084200 (-)
LOC110535142 mapk1 coding downstream 153605 83922608 ~ 83982640 (-)
LOC110536511 NA coding downstream 216616 83914813 ~ 83921303 (-)
ypel1 ypel1 coding downstream 233881 83873900 ~ 83903039 (-)
LOC118937426 LOC100380868 coding downstream 439639 83692703 ~ 83698034 (-)
adamts3 LOC107719190 coding upstream 97899 84235293 ~ 84426152 (-)
smarca2 NA coding upstream 364491 84501885 ~ 84719806 (-)
dmrt2a LOC106570979 coding upstream 823897 84961291 ~ 84965767 (-)
LOC118937429 dmrt3 coding upstream 908720 85046114 ~ 85122372 (-)
kank1a kank1 coding upstream 1102215 85239609 ~ 85392002 (-)
G1025724 NA non-coding downstream 23606 84112208 ~ 84112639 (-)
G1025723 NA non-coding downstream 24759 84109539 ~ 84111486 (-)
G1025728 NA non-coding downstream 26848 84108183 ~ 84109397 (-)
G1025721 NA non-coding downstream 31922 84103214 ~ 84104323 (-)
G1025709 NA non-coding downstream 53865 84081540 ~ 84082380 (-)
G1025744 NA non-coding upstream 6611 84144005 ~ 84144273 (-)
G1025746 NA non-coding upstream 7033 84144427 ~ 84144650 (-)
G1025752 NA non-coding upstream 47466 84184860 ~ 84195494 (-)
G1026027 NA non-coding upstream 83432 84220826 ~ 84227577 (-)
G1026031 NA non-coding upstream 88999 84226393 ~ 84235238 (-)
G1025498 NA other downstream 417637 83683265 ~ 83718776 (-)
G1025467 NA other downstream 509455 83544297 ~ 83626790 (-)
G1025481 NA other downstream 570671 83562302 ~ 83565574 (-)
LOC110536484 LOC106570928 other downstream 1877280 82257489 ~ 82522382 (-)
G1026586 NA other upstream 1049932 85187326 ~ 85197500 (-)
G1026978 NA other upstream 1475958 85613352 ~ 85614375 (-)

Expression


Co-expression Network