G1026091


Basic Information

Item Value
gene id G1026091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 84372978 ~ 84378903 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1167853
cacagaaatagaactcctttctatttctgacgcagatcgcgctgcaagtcctgcctctcccatctcctcattggtttatagaagcaggtacccacgtacCATCTGATTGTCAGTAGTTATTACTAATCTCCATGTCAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCGTCCCCATGTCAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATGTCAGTCGTTATTTCTCATCTCCATGACAGTAGTCTGTTGGTAGTTATTTCTCATCTCCATTTCAGTAGTTATTACTCATCTCCATGACAGTAGTATGTTAGTAGTTATTTCTCATCTCCATGTCAGTAGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTTATTACTCATCTCCATGTCAGTCTTCTGTTAGTAGTTATTACTCATCTTCATGCCAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTACATGTCAGTAGTCTGTCAGCAGTTATTACTCATATCCATGTCAGTAGTCTGTCAGTAGTTATTTCTCATCTCAATGTCAGTAGTTATTACTCATCTCCATGTCAGTAGTTATTACTCATCTCCATGTCAGTAGTCTCTTGGTAGTTATTTCTCATCTCCATGACAGTAGTTATTTCTCATCCCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCCCCATGTCAGTAGTTATTACTCATCTCCATGTCAGTACTCTGTTAGTAGTTATTACTCATCTTCATGTCAGTTGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCCCCATGTCAGTAGTTATTACTCATCTCCATGTCAGTACTCTGTTAGTAGTTATTACTCATCTTCATGTCAGTTGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCCCCATGTCAGTAGTTATTACTCATCTCCATGTCAGTACTCTGTTAGTAGTTATTACTCATCTTCATGTCAGTTGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCCCCATGTCAGTAGTTATTACTCATCTCCATGTCAGTACTCTGTTAGTAGTTATTACTCATCTTCATGCCAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTTCTCATCTCCATGACAGTAGTCTGTTAGTAGTTATTATTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCcaggttagtagttagtagttattaCTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCACGTTAGTAGTTATTATTCATCTCCATGTCAGTAGTTATTACTCATCTCCGTGTCAGTAGTTATTACTCATCTCCGTGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTCAGTAGTTATTACTCATCTCAGTGTCAGTAGTTAGTAGTTATTGCTCATCTACCACTGACATCCTGCCTACTTCTATCTACAGAGAACTGTAGTTCTACTACCTATTGACTCCTACGGACCTCCTGCCTACTTCTACTACCTACTGACTCCTGCCTTCTACTGACTCCTGCCTACTACTACTGCCTACTACTactgcctcctgactcctgcctactaatactgcctcctgattcctgcctactactacttcctactactactactgcatactactactgcctcctgactcctgcctactaatactgcctcctgactcctgcctactactacttcctactactactactgtctactactactgcctcctgactcctgcctactaatactgcctcctgactcctgcctactactacttcctactactactactgcctactaatactgcctcctgactcctgcctactactacttcctactactactactgcctacTACTGctgcctcctgactcctgcctactactacttcctactactactactgcatactactactactacctactgactcctgcctactactactgcctcctgact
>TU1167854
TAGTCTGTTAGTAGTTGTTAGTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTTCTCATCTCCATGTCAGTAGTTATTTCTCATCTCCATGTCAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTGGTAGTTATTTCTCATCTCCATGtcagtagttagtagttactacTCATCCCCATGTCAGTAGTTATTACTCATCTCCATGTCATTAGTCTGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATGTTGGTAGTTATTTCTCATCTCCATATCAGTAGTTAGTAGTTATTTCTCATCTCCATGTCAGTAGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTTATTACTCATCTCCATGTTAGTCGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTTCTCATCTCCACGTTAGTAGTTCGTAGTTATTACTCATCTCCAccttagtagttagtagttattaCTCATCTCCACGTTAGTAGTTATTTCTCATCTCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTTAGCAGTTATTACTCATATCCATGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATTTTGGTAGTTATTTCTCATCTCCATATCAGTAGTTAGTAGTTATTACTCATCTCCATGAGAGTAGTCTGTTAGTAGTTATTACTCATCTCCACGTTAGTAGTTATTATTCATCTCCATGTCAGTAGTTATTACTCATCTCCGTGTCAGTAGTTATTACTCATCTCCGTGTCAGTAGTCTGTTAGTAGTTATTACTCATCTCCATGTTAGTAGTTATTACTCATCTCCATGTCAGTAGTCTGTCAGTAGTTATTACTCATCTCAGTGTCAGTAGTTAGTAGTTATTGCTCATCTACCACTGACATCCTGCCTACTTCTATCTACAGAGAACTGTAGTTCTACTACCTATTGACTCCTACGGACCTCCTGCCTACTTCTACTACCTACTGACTCCTGCCTTCTACTGACTCCTGCCTACTACTACTGCCTACTACTactgcctcctgactcctgcctactaatactgcctcctgattcctgcctactactacttcctactactactactgcatactactactgcctcctgactcctgcctactaatactgcctcctgactcctgcctactactacttcctactactactactgtctactactactgcctcctgactcctgcctactaatactgcctcctgactcctgcctactactacttcctactactactactgcctactaatactgcctcctgactcctgcctactactacttcctactactactactgcctacTACTGctgcctcctgactcctgcctactactacttcctactactactactgcatactactactactacctactgactcctgcctactactactgcctcctgact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1167853 False 2265 lncRNA 0.40 4 84372978 84378903
TU1167854 True 1493 lncRNA 0.40 2 84372978 84376000

Neighbor

gene id symbol gene type direction distance location
grsf1 grsf1 coding downstream 288778 84045512 ~ 84084200 (-)
LOC110535142 mapk1 coding downstream 390338 83922608 ~ 83982640 (-)
LOC110536511 NA coding downstream 453349 83914813 ~ 83921303 (-)
ypel1 ypel1 coding downstream 470614 83873900 ~ 83903039 (-)
LOC118937426 LOC100380868 coding downstream 676372 83692703 ~ 83698034 (-)
smarca2 NA coding upstream 122982 84501885 ~ 84719806 (-)
dmrt2a LOC106570979 coding upstream 582388 84961291 ~ 84965767 (-)
LOC118937429 dmrt3 coding upstream 667211 85046114 ~ 85122372 (-)
kank1a kank1 coding upstream 860706 85239609 ~ 85392002 (-)
dapk1 dapk1 coding upstream 1073282 85452185 ~ 85658741 (-)
G1026031 NA non-coding downstream 137740 84226393 ~ 84235238 (-)
G1026027 NA non-coding downstream 145401 84220826 ~ 84227577 (-)
G1025752 NA non-coding downstream 177484 84184860 ~ 84195494 (-)
G1025746 NA non-coding downstream 228328 84144427 ~ 84144650 (-)
G1025744 NA non-coding downstream 228705 84144005 ~ 84144273 (-)
G1026111 NA non-coding upstream 41674 84420577 ~ 84421700 (-)
G1026152 NA non-coding upstream 85755 84464658 ~ 84465602 (-)
G1026164 NA non-coding upstream 138174 84517077 ~ 84520777 (-)
G1026165 NA non-coding upstream 145492 84524395 ~ 84534134 (-)
G1026167 NA non-coding upstream 157369 84536272 ~ 84539653 (-)
G1025498 NA other downstream 654370 83683265 ~ 83718776 (-)
G1025467 NA other downstream 746188 83544297 ~ 83626790 (-)
G1025481 NA other downstream 807404 83562302 ~ 83565574 (-)
LOC110536484 LOC106570928 other downstream 2114013 82257489 ~ 82522382 (-)
G1026586 NA other upstream 808423 85187326 ~ 85197500 (-)
G1026978 NA other upstream 1234449 85613352 ~ 85614375 (-)

Expression


Co-expression Network